Gene Ping_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0178 
Symbol 
ID4626823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp226889 
End bp227716 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content38% 
IMG OID639795368 
Productgeneral secretion pathway protein B 
Protein accessionYP_941645 
Protein GI119943965 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.953003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAA TTCTAGCGGC ACTGCAAAAG CAAAAATCAT CACCAGGCGC TCATTTTATC 
CAACAACCAG AGGTTGAAAA AGGACTGTTT AAATGGCGAG TTACTTTATT AATATCCCTA
TTGGTTATCA TCAGTTTATT AAGTGTATTA CTTTATCTGC AACTTAACGG AGAGACGAAT
GGCATAAAGA TAAAACAATC AATTGTGCTA GATAAAGTGG TAGATGTGCT TGAAGTTGAT
TCTGATATTA TGGAAGTTGA TTCTAATATT ATTAAAGTTG ATTCTGACAT TATTGAAGTT
ACCCCGCCCG CTGTTAATGA AGTGCCTATT AAAATAATCA AAAAAGCGCC CAAAGCCGTT
AAGGAAATGA CTTTTGTAAC CCAACCTTTA CCCGAGGTTG AAAAGCCTGA GCCACCCATA
AAGTTAGTCC CGGACGAATC AACCACAGAT GCTGCCAATT TAACCAGCGA GCTTGATTAT
TCGGCTGTTT CTAATGAGTT ACAACAACGT TTTGAGTTCG CCTTAGCCGA CAGTAAAAAA
CAGAATAAAT TATCTCCGAT CGAGTTAAGC CATGATGGCA GAGACCTTTA TGAGATGGCC
GGTAACTTTC AGCAAAAAGT GCCAAGCATA AGATATGATA CACATATCTA TTCGAGCATT
GTAGAAGAAC GTTGGATTAA GATTAATGGC AACAAATTAA AGGAAGGGCA GTTTGACCCC
CAAGGAAAAA TACAGCTGCT GGAGATTCAG CCCAATCGTA GTATCTTTCG ATTGGATCGG
CAAAGTTTTA GTTTAGAGTC ATTAACTGAT TGGAAGGTTA ACAGATAG
 
Protein sequence
MSTILAALQK QKSSPGAHFI QQPEVEKGLF KWRVTLLISL LVIISLLSVL LYLQLNGETN 
GIKIKQSIVL DKVVDVLEVD SDIMEVDSNI IKVDSDIIEV TPPAVNEVPI KIIKKAPKAV
KEMTFVTQPL PEVEKPEPPI KLVPDESTTD AANLTSELDY SAVSNELQQR FEFALADSKK
QNKLSPIELS HDGRDLYEMA GNFQQKVPSI RYDTHIYSSI VEERWIKING NKLKEGQFDP
QGKIQLLEIQ PNRSIFRLDR QSFSLESLTD WKVNR