Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0178 |
Symbol | |
ID | 4626823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 226889 |
End bp | 227716 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639795368 |
Product | general secretion pathway protein B |
Protein accession | YP_941645 |
Protein GI | 119943965 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.953003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAACAA TTCTAGCGGC ACTGCAAAAG CAAAAATCAT CACCAGGCGC TCATTTTATC CAACAACCAG AGGTTGAAAA AGGACTGTTT AAATGGCGAG TTACTTTATT AATATCCCTA TTGGTTATCA TCAGTTTATT AAGTGTATTA CTTTATCTGC AACTTAACGG AGAGACGAAT GGCATAAAGA TAAAACAATC AATTGTGCTA GATAAAGTGG TAGATGTGCT TGAAGTTGAT TCTGATATTA TGGAAGTTGA TTCTAATATT ATTAAAGTTG ATTCTGACAT TATTGAAGTT ACCCCGCCCG CTGTTAATGA AGTGCCTATT AAAATAATCA AAAAAGCGCC CAAAGCCGTT AAGGAAATGA CTTTTGTAAC CCAACCTTTA CCCGAGGTTG AAAAGCCTGA GCCACCCATA AAGTTAGTCC CGGACGAATC AACCACAGAT GCTGCCAATT TAACCAGCGA GCTTGATTAT TCGGCTGTTT CTAATGAGTT ACAACAACGT TTTGAGTTCG CCTTAGCCGA CAGTAAAAAA CAGAATAAAT TATCTCCGAT CGAGTTAAGC CATGATGGCA GAGACCTTTA TGAGATGGCC GGTAACTTTC AGCAAAAAGT GCCAAGCATA AGATATGATA CACATATCTA TTCGAGCATT GTAGAAGAAC GTTGGATTAA GATTAATGGC AACAAATTAA AGGAAGGGCA GTTTGACCCC CAAGGAAAAA TACAGCTGCT GGAGATTCAG CCCAATCGTA GTATCTTTCG ATTGGATCGG CAAAGTTTTA GTTTAGAGTC ATTAACTGAT TGGAAGGTTA ACAGATAG
|
Protein sequence | MSTILAALQK QKSSPGAHFI QQPEVEKGLF KWRVTLLISL LVIISLLSVL LYLQLNGETN GIKIKQSIVL DKVVDVLEVD SDIMEVDSNI IKVDSDIIEV TPPAVNEVPI KIIKKAPKAV KEMTFVTQPL PEVEKPEPPI KLVPDESTTD AANLTSELDY SAVSNELQQR FEFALADSKK QNKLSPIELS HDGRDLYEMA GNFQQKVPSI RYDTHIYSSI VEERWIKING NKLKEGQFDP QGKIQLLEIQ PNRSIFRLDR QSFSLESLTD WKVNR
|
| |