Gene Ping_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0136 
Symbol 
ID4626047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp178308 
End bp179492 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content40% 
IMG OID639795329 
Productmannonate dehydratase 
Protein accessionYP_941606 
Protein GI119943926 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0645545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA CTTGGCGTTG GTATGGCCCA AATGATCCCG TATCGCTAAA TGATATTCGT 
CAAGCAGGCG CAACGGGTAT TGTTAATGGG TTGCATGATA TCCCAAATGG GCAGGTGTGG
GGTAAAAAAG CAATTTTAGC CCGTAAGGAA ATTATTGAAG GAAGTAGTTT AACTTGGTCG
GTGGTTGAAA GTGTCCCTGT ACATGAAGAG ATTAAAACGC GTACAGGTAA TTATGCAACA
TGGATTGAAA ATTATAAGCA AACGCTTATT AATTTAGCTG AATGTGGGAT TGACACTGTT
TGCTATAACT TTATGCCGGT GCTTGATTGG ACACGGACTG ATCTTGAATT TGAGATGGAA
GATGGATCGC GCGCATTACG TTTTGATCAA ATTGCTTTTG CTGCATTTGA ATTGCATATT
CTTAAGCGTC CGAATGCAGA AAATGATTAC AGCGCAGATG AGCAGCTTCA AGCTAAAGTC
TATTTTGATA ATATGTCTGA GGCACAAATC GCCAAATTAA CTGCGAATAT TATTGCGGGT
TTACCGGGTG CTGAAGAAGG TTACACACTT GAGGAGTTCC AGGCGCAATT AGATCGTTAT
AAAGACATAG ATAAAGAGAC ATTACGTAAT AATTTAGCCT TTTTTTTAAA AGAATTAATG
CCAATTTGTG AATCATACGG GTTGAAATTG GCCATTCATC CAGATGATCC ACCACGTCCT
ATTTTAGGCT TGCCACGTGT CGTTTCTACT ATTGATGATA TCAACTGGTT AACTACACAA
GTACCAGAAA AAATGAACGG TATCACGATG TGTACGGGCT CTTACGGTGT ACGTGGTGAT
AATGATTTAG TGAATATGAT CAAGCAGCAT GGCGATCGAA TTTACTTCAC GCATCTACGT
TCGACACAAA GAGAAAAAAA TCAAAAGAGT TTCCATGAAG CAGCGCACCT TGGCGGTGAT
GTGGACATGT ATAACGTTGT GATGGAATTA CTCAGAGAAG AGCAGCGCCG TGAAAAATCA
GGTAATATCC GTTTGATTCC TATGCGTCCT GATCATGGTC ACCAGATGCT TGATGATTTG
AAAAAGAAAA CCAATCCAGG TTATTCGGCT ATAGGCCGTT TAAAGGGATT GGCTGAAGTA
CGTGGTTTGG AAGTCGGTTT GAAACGCGCT TTTTTTAATA AATAA
 
Protein sequence
MEQTWRWYGP NDPVSLNDIR QAGATGIVNG LHDIPNGQVW GKKAILARKE IIEGSSLTWS 
VVESVPVHEE IKTRTGNYAT WIENYKQTLI NLAECGIDTV CYNFMPVLDW TRTDLEFEME
DGSRALRFDQ IAFAAFELHI LKRPNAENDY SADEQLQAKV YFDNMSEAQI AKLTANIIAG
LPGAEEGYTL EEFQAQLDRY KDIDKETLRN NLAFFLKELM PICESYGLKL AIHPDDPPRP
ILGLPRVVST IDDINWLTTQ VPEKMNGITM CTGSYGVRGD NDLVNMIKQH GDRIYFTHLR
STQREKNQKS FHEAAHLGGD VDMYNVVMEL LREEQRREKS GNIRLIPMRP DHGHQMLDDL
KKKTNPGYSA IGRLKGLAEV RGLEVGLKRA FFNK