| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4285 |
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| Symbol | |
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| ID | 8255421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 5164300 |
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| End bp | 5164980 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937951 |
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| Product | peptidase M15D vanX D-ala-D-ala dipeptidase |
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| Protein accession | YP_003094538 |
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| Protein GI | 255534166 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT TATTCCTTTT ATTGTTTCTG GCTCCGTTTT GCGCTGTTTT TGCGCAGGAA
AATAAGCTCA ATCCGTATGG TTTAAAGGTG TGTTCTTATG CCGATTACCT GGATTCCTGC
AAAAAAAACA GCGACAATAA GCTACTGGAG ATCAAAAAAT ATGTTCCGGG TATTGTGCTC
GACATTAAAT ACGCCACAGC GGACAATTTT ATGAACCGCG TCATGTACAA GCAGGCAAGG
GCCTTTGCAC GCAGACCGGT GGTTATACAA TTGAAAAAAA TTCAGGCAGA GCTTAAAAAA
GCAGGTTACG GGTTAAAAAT ATTTGACGCC TACCGCCCTT ATCAGGTTAC CCTGGCTTTT
TACGAAGGGG CTTCGGACAA GAACTTTGTG GCCAACCCTA AAAAGGGTTC AAAACATAAC
AGGGGTTGCG CCGTAGACCT GACTTTAATT GATTTAAAAA CCAGGAAAGC ACTGGCCATG
CCCACACCTT ATGACAGTTT TGCCCCCGAG GCCTCTTCCA CTTATGCAGA CCTGCCCCCG
GAAATCCTGA AAAACAGAGA GTACCTGATC AATATCATGC ACAGACACGG TTTCAGGGTA
ATCCCCAATG AGTGGTGGCA TTTTGATTTC ATGGGCTGGC AAAATTACGA CCTCATGGAT
ATTCCTTTTG AGCAGCTATA G
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| Protein sequence | MKKLFLLLFL APFCAVFAQE NKLNPYGLKV CSYADYLDSC KKNSDNKLLE IKKYVPGIVL
DIKYATADNF MNRVMYKQAR AFARRPVVIQ LKKIQAELKK AGYGLKIFDA YRPYQVTLAF
YEGASDKNFV ANPKKGSKHN RGCAVDLTLI DLKTRKALAM PTPYDSFAPE ASSTYADLPP
EILKNREYLI NIMHRHGFRV IPNEWWHFDF MGWQNYDLMD IPFEQL
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