| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4254 |
|---|
| Symbol | |
|---|
| ID | 8255390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 5132248 |
|---|
| End bp | 5132817 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644937920 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_003094507 |
|---|
| Protein GI | 255534135 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.908363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAATA TTCTAAAAAA AATAAAAAGC ATTTATCCCT TAAAAGAACA GCAACTAAAT
CAATTGCTGG AGCTGATGGA AAAGATAGAA TTGCCCAAAG GCCGGCTGGT TATTCATACA
GGTCGTGTCG AAAAGTCGGT TTTTTTTATT GAAAAGGGAA TTGCCAGAGC TTTTTGTGAG
GGCCCTGAAA GTCAGATCAC CTTTTGGTTT GGGATGGAGG GAGACCTGTT GTTTTCTTAC
AACAGCTACA TCAATGGGTT GCCGGGCTAT GAGAGTATAG AGTTGCTGGA AAACAGTACA
TTGTATGAAA TCAAGACAGC AGAACTGGAA GTTCTTTTTC AACAGGATGC TGCATTTGCG
AACTGGGGAA GGAAGCTTGC CGAGCTGGAA CTGATCAAAT CGGAAGCTTG TTTTATAGGG
CGGCTCTTTA AAACGGCATC CGAACGTTAT GCTGAACTTT TGCGCGACAA CCCGGCACTG
ATCCAAAGGA TCCAGCTGGG ATATATTGCT TCTTACCTTG GAGTAACCCA GGTAACTTTA
AGCAGGATCA GGGCAGAGCT CAGGGCTTAA
|
|---|
| Protein sequence | MQNILKKIKS IYPLKEQQLN QLLELMEKIE LPKGRLVIHT GRVEKSVFFI EKGIARAFCE
GPESQITFWF GMEGDLLFSY NSYINGLPGY ESIELLENST LYEIKTAELE VLFQQDAAFA
NWGRKLAELE LIKSEACFIG RLFKTASERY AELLRDNPAL IQRIQLGYIA SYLGVTQVTL
SRIRAELRA
|
|---|
| |