Gene Phep_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4243 
Symbol 
ID8255379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5119126 
End bp5120784 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content43% 
IMG OID644937909 
Producthypothetical protein 
Protein accessionYP_003094496 
Protein GI255534124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.422157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTG CCGCATGTAC CATGCTTACC GGCATTGCCG CTTGTACCAA TTCGCAGAAA 
AAAAGCAATA ACGAAACTAA AAACAACAGT TCAGGCAACG ATAGCCTTCA GCGCTATGTA
AATGAGCGCC TGGGCATTTA TGAAACGGTT AAACTGACCA CCAACCTGAA CGATTTAACG
GTTAATGAAC GCAAAATACT GCCCCTGCTC ATCCAGGCAG CTAAAATTAT GGACGAATTG
TTCTGGAAAC AGGCATACCC TCAGCGCGAC AGTTTGTTAA GCACCATTAA AGACGAGAAA
ACAAAGGCCT TTGTTGAAAT AAATTATGGC CCCTGGGACA GGCTGAACGG CGACAAACCT
TTTATAGCTG GCATAGGCCC CAAGCCGGCC GCAGCTAATT TTTATCCTGC AGGGATGACC
AAAGAAGAAC TGGAAAAATC TGATGTAAAA GACAAATTCG GACTATATTC AGTTATTCAA
AGAGACACAG CCGGAAAACT GACCGCCGTT CCCTATCACA TCCTTTATGC GGCTGAACTG
CAAAAAGCAT CCAACCTGCT TAAACAGGCC GCACTGCTTG CCGAAGATGC GGGCTTTAAA
AAATACCTGA ACCTTCGTGC CGATGCATTG GTTACTGATG TTTACGGCCC AAGTGATTAT
GCCTGGCTGG ACATGAAAAC CAATACGCTT GACATCATTA TTGGCCCTAT AGAGAACTAT
GAGGACAAGC TTTTCAATGC AAGGGCCGCT TATGAATCGT ATGTGCTGGT TAAAGATAAG
GTATGGAGCA AACGGCTTGC GAAATACGTT AGCATGCTGC CGGATCTGCA AAAAGGCCTT
CCGGTTGAAG CTAAGTATAA AACTGAAAAG CCAGGTACAG ATTCTGAACT GAATGCTTAT
GATGTACTTT ATTATGCCGG AGATTGTAAT GCAGGATCCA AAACCATAGC AGTTAACCTG
CCCAACGATG AAGTCATACA GCAAAAGAAA GGAACCAGGC GTTCGCAGCT AAAAAATGCG
ATGAAAGCCA AATTTGACAA GATCCTCGTT CCAATTGCAA AAGAGCTTAT TGACAAAGAA
CAACAACAGT ATGTCAATTT TGATGCTTTT TTTGCCAATG TGATGTTCCA TGAGGTGGCA
CACGGACTGG GTATCAAGAA AACGGTTACC GGAAAAGGCT TTGTGAAAGA AGCACTTCAG
GAACAATATT CATGGCTGGA AGAAGGAAAA GCAGATGTAC TGGGTCTGTA TATGGTTACC
GGATTACTTA AAAAAGCTGA ACTGCAGGGC GACATTAAAG CATTTTATAC CACCTACATG
GCAGGAATTT TACGTTCTGT AAGGTTTGGG GCTGCCAGCG CACATGGCAA GGCCAATATG
CAGTGTTTCA ACTTCTTTAA GGAAAACGGA GCCTTTATCA GGAACAGTGA TGGCACCTAT
AAAGTCGATT TCAGCAAATT TGAAGGTGCA ATGAACAAGC TGAGCCGGAT GATCATTATG
CTGCAGGGTA ATGGAGATAA GGCCGCCGTA GAAAGCACCC AGAAAAAGAT GGCTGTAATT
TCACCTGAAC TACAGGGAGA TCTGGATAAA TTAACCAAAA GAGGAATTCC TGTTGATATT
ATTTTTGAAC AGGGGGTCGA CGTTTTAGGC GTTAAATAA
 
Protein sequence
MIIAACTMLT GIAACTNSQK KSNNETKNNS SGNDSLQRYV NERLGIYETV KLTTNLNDLT 
VNERKILPLL IQAAKIMDEL FWKQAYPQRD SLLSTIKDEK TKAFVEINYG PWDRLNGDKP
FIAGIGPKPA AANFYPAGMT KEELEKSDVK DKFGLYSVIQ RDTAGKLTAV PYHILYAAEL
QKASNLLKQA ALLAEDAGFK KYLNLRADAL VTDVYGPSDY AWLDMKTNTL DIIIGPIENY
EDKLFNARAA YESYVLVKDK VWSKRLAKYV SMLPDLQKGL PVEAKYKTEK PGTDSELNAY
DVLYYAGDCN AGSKTIAVNL PNDEVIQQKK GTRRSQLKNA MKAKFDKILV PIAKELIDKE
QQQYVNFDAF FANVMFHEVA HGLGIKKTVT GKGFVKEALQ EQYSWLEEGK ADVLGLYMVT
GLLKKAELQG DIKAFYTTYM AGILRSVRFG AASAHGKANM QCFNFFKENG AFIRNSDGTY
KVDFSKFEGA MNKLSRMIIM LQGNGDKAAV ESTQKKMAVI SPELQGDLDK LTKRGIPVDI
IFEQGVDVLG VK