Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4243 |
Symbol | |
ID | 8255379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 5119126 |
End bp | 5120784 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937909 |
Product | hypothetical protein |
Protein accession | YP_003094496 |
Protein GI | 255534124 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.422157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCATTG CCGCATGTAC CATGCTTACC GGCATTGCCG CTTGTACCAA TTCGCAGAAA AAAAGCAATA ACGAAACTAA AAACAACAGT TCAGGCAACG ATAGCCTTCA GCGCTATGTA AATGAGCGCC TGGGCATTTA TGAAACGGTT AAACTGACCA CCAACCTGAA CGATTTAACG GTTAATGAAC GCAAAATACT GCCCCTGCTC ATCCAGGCAG CTAAAATTAT GGACGAATTG TTCTGGAAAC AGGCATACCC TCAGCGCGAC AGTTTGTTAA GCACCATTAA AGACGAGAAA ACAAAGGCCT TTGTTGAAAT AAATTATGGC CCCTGGGACA GGCTGAACGG CGACAAACCT TTTATAGCTG GCATAGGCCC CAAGCCGGCC GCAGCTAATT TTTATCCTGC AGGGATGACC AAAGAAGAAC TGGAAAAATC TGATGTAAAA GACAAATTCG GACTATATTC AGTTATTCAA AGAGACACAG CCGGAAAACT GACCGCCGTT CCCTATCACA TCCTTTATGC GGCTGAACTG CAAAAAGCAT CCAACCTGCT TAAACAGGCC GCACTGCTTG CCGAAGATGC GGGCTTTAAA AAATACCTGA ACCTTCGTGC CGATGCATTG GTTACTGATG TTTACGGCCC AAGTGATTAT GCCTGGCTGG ACATGAAAAC CAATACGCTT GACATCATTA TTGGCCCTAT AGAGAACTAT GAGGACAAGC TTTTCAATGC AAGGGCCGCT TATGAATCGT ATGTGCTGGT TAAAGATAAG GTATGGAGCA AACGGCTTGC GAAATACGTT AGCATGCTGC CGGATCTGCA AAAAGGCCTT CCGGTTGAAG CTAAGTATAA AACTGAAAAG CCAGGTACAG ATTCTGAACT GAATGCTTAT GATGTACTTT ATTATGCCGG AGATTGTAAT GCAGGATCCA AAACCATAGC AGTTAACCTG CCCAACGATG AAGTCATACA GCAAAAGAAA GGAACCAGGC GTTCGCAGCT AAAAAATGCG ATGAAAGCCA AATTTGACAA GATCCTCGTT CCAATTGCAA AAGAGCTTAT TGACAAAGAA CAACAACAGT ATGTCAATTT TGATGCTTTT TTTGCCAATG TGATGTTCCA TGAGGTGGCA CACGGACTGG GTATCAAGAA AACGGTTACC GGAAAAGGCT TTGTGAAAGA AGCACTTCAG GAACAATATT CATGGCTGGA AGAAGGAAAA GCAGATGTAC TGGGTCTGTA TATGGTTACC GGATTACTTA AAAAAGCTGA ACTGCAGGGC GACATTAAAG CATTTTATAC CACCTACATG GCAGGAATTT TACGTTCTGT AAGGTTTGGG GCTGCCAGCG CACATGGCAA GGCCAATATG CAGTGTTTCA ACTTCTTTAA GGAAAACGGA GCCTTTATCA GGAACAGTGA TGGCACCTAT AAAGTCGATT TCAGCAAATT TGAAGGTGCA ATGAACAAGC TGAGCCGGAT GATCATTATG CTGCAGGGTA ATGGAGATAA GGCCGCCGTA GAAAGCACCC AGAAAAAGAT GGCTGTAATT TCACCTGAAC TACAGGGAGA TCTGGATAAA TTAACCAAAA GAGGAATTCC TGTTGATATT ATTTTTGAAC AGGGGGTCGA CGTTTTAGGC GTTAAATAA
|
Protein sequence | MIIAACTMLT GIAACTNSQK KSNNETKNNS SGNDSLQRYV NERLGIYETV KLTTNLNDLT VNERKILPLL IQAAKIMDEL FWKQAYPQRD SLLSTIKDEK TKAFVEINYG PWDRLNGDKP FIAGIGPKPA AANFYPAGMT KEELEKSDVK DKFGLYSVIQ RDTAGKLTAV PYHILYAAEL QKASNLLKQA ALLAEDAGFK KYLNLRADAL VTDVYGPSDY AWLDMKTNTL DIIIGPIENY EDKLFNARAA YESYVLVKDK VWSKRLAKYV SMLPDLQKGL PVEAKYKTEK PGTDSELNAY DVLYYAGDCN AGSKTIAVNL PNDEVIQQKK GTRRSQLKNA MKAKFDKILV PIAKELIDKE QQQYVNFDAF FANVMFHEVA HGLGIKKTVT GKGFVKEALQ EQYSWLEEGK ADVLGLYMVT GLLKKAELQG DIKAFYTTYM AGILRSVRFG AASAHGKANM QCFNFFKENG AFIRNSDGTY KVDFSKFEGA MNKLSRMIIM LQGNGDKAAV ESTQKKMAVI SPELQGDLDK LTKRGIPVDI IFEQGVDVLG VK
|
| |