| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4178 |
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| Symbol | |
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| ID | 8255313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5053364 |
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| End bp | 5054350 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937843 |
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| Product | Transketolase central region |
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| Protein accession | YP_003094431 |
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| Protein GI | 255534059 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.008867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAGAGA TTCAATTTAG AGAAGCTTTG CGTGAGGCCC TTAGCGAAGA AATGCGTAAA
AATGAAAACG TTTTCCTTAT GGGCGAGGAA GTTGCGCAAT ACAACGGCGC TTATAAGGTT
AGTCAGGGCA TGCTTGATGA ATTTGGCGAT AAACGTGTAA TTGATACACC GATTGCTGAA
CTGGGTTTTG CCGGGATTGC CATAGGTGCT GCAATGAACG GATTGACTCC GGTTGTAGAG
TTTATGACTT TTAACTTCTC TTTGGTTGCT ATTGATCAGA TCATTAACGG TGCAGCTAAA
ATGTTGTCTA TGAGTGGCGG ACAGTTTCCT GTGCCAATCG TATTCCGTGG CCCAACTGGT
AATGCTGGTC AGCTTGGTGC ACAGCACTCT CAGAATTTTG AGAACTGGTA TGCCAACTGT
CCGGGTTTAA AGGTTGTTGT TCCTTCAACA CCTTACGAAG CTAAAGGATT GCTTAAACAA
GCTATATTAG ATCCTGATCC GGTTATTTTT ATGGAATCAG AGGTGATGTA TGGAGATAAA
GGAGAGGTTC CTGAAGAAGA ATATTACCTG CCAATTGGTA AGGCCAATGT AGTAAAAGAG
GGATCGGACG TAACTATCGT TACTTTTGGA AAAATGCTTA CCCGTGTGGT AAATCCTGCT
GTAGAGGAGC TGACCAAGGA AGGCATCAAT GTTGAGGTCA TCGATTTGCG TACTGTACGT
CCTATCGATT ATGCAACGAT AATCGAGTCG GTGAAGAAAA CAAACCGCCT GCTGGTGGTT
GAAGAAGCCT GGCCTTTGGC TTCTATTTCG TCTGAAATCG CATTTAACGT TCAGAAAAAT
GCTTTTGATT ATTTAGATGC ACCTGTATTG CGTATTACCT GTGCAGATGT GCCTTTGCCT
TACGCTCCTA CACTGATTGC AGCAAGTTTA CCTAATGCAG AGAAAGTAGT AAAAGCAGTA
AAAGAGGTCA TGTACCTGAA CAAATAA
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| Protein sequence | MREIQFREAL REALSEEMRK NENVFLMGEE VAQYNGAYKV SQGMLDEFGD KRVIDTPIAE
LGFAGIAIGA AMNGLTPVVE FMTFNFSLVA IDQIINGAAK MLSMSGGQFP VPIVFRGPTG
NAGQLGAQHS QNFENWYANC PGLKVVVPST PYEAKGLLKQ AILDPDPVIF MESEVMYGDK
GEVPEEEYYL PIGKANVVKE GSDVTIVTFG KMLTRVVNPA VEELTKEGIN VEVIDLRTVR
PIDYATIIES VKKTNRLLVV EEAWPLASIS SEIAFNVQKN AFDYLDAPVL RITCADVPLP
YAPTLIAASL PNAEKVVKAV KEVMYLNK
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