Gene Phep_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4129 
Symbol 
ID8255264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4990500 
End bp4991297 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content40% 
IMG OID644937794 
Producthypothetical protein 
Protein accessionYP_003094382 
Protein GI255534010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0991199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.946637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TTAGAAATTT ATTAATTATA TTTTGTTCGC TACTATTTTT ATCCAGTTGC 
CAGAAGACTG TTGGAGATTA TGGCGACGTT CGGAAATTTG GTGATGAACA GCCTCTGATT
AAAATTAACT ACGCTTCTCC TTATAAAGAT GACAGGATGG TTATAGTGAA GTTTAACGGT
AGACGGGTAA CTTCCCAGAT CCAGAACCGT ACACCTTTTC CCGGTGGGGG ATACAATACG
CGTGGAGATG TTAGAGCTGA TTACCTGACA GTTGACCCTG GGCAGGTGAA GGTTACTGTT
GCAATGCCAT TCAAGAAAGA TAATGGGTTG GACTCATTAG AGTTATATAA TACCACCATA
AACATTGAAA GCGGCAAAAA ATATGTTATA CATATTGCGG ATACGGCTAA GTTTACAAAG
TCTGTACTTA CGGAAGAAAA TTTCTTGAAA CCCGATTCCG GCTATGCGGT ATACCGCTTT
ATTAATTTAA TGCCAAATGT GCCTGCTGTA GACTTGTATT ATGGGCAAAG TGCAACTGAT
AATGCAGCAG ATAAATTGGT GGCAGGAAAT ATTGGTTATC TGCAAATCAG CAATTACATT
ACGTTGAACC GATATGCTGG AAGAACCTGG AAAATTCGTC CGGCTGGAGC AGCGGTTACG
ACAGCTACGG TTTTAGCAAA TTATACCAGT GCCAGTTCAT TATTAAATCA ACGTACATAT
ACTGTATATG CACACGGATA TGCAGGGATG TCCTCTGCTA CAGAAAAGCC TTATGTGTCC
TTTTTCCACA TCAGGTAG
 
Protein sequence
MKIFRNLLII FCSLLFLSSC QKTVGDYGDV RKFGDEQPLI KINYASPYKD DRMVIVKFNG 
RRVTSQIQNR TPFPGGGYNT RGDVRADYLT VDPGQVKVTV AMPFKKDNGL DSLELYNTTI
NIESGKKYVI HIADTAKFTK SVLTEENFLK PDSGYAVYRF INLMPNVPAV DLYYGQSATD
NAADKLVAGN IGYLQISNYI TLNRYAGRTW KIRPAGAAVT TATVLANYTS ASSLLNQRTY
TVYAHGYAGM SSATEKPYVS FFHIR