| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4126 |
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| Symbol | |
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| ID | 8255261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4984956 |
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| End bp | 4988360 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937791 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003094379 |
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| Protein GI | 255534007 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.504086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA AATTACTCAT ACTGTTCTTG AGTACATTTT TGCTGGCGGT CCAGGCGATT
GCCCAGCAAA TTACAATAAC AGGTACGGTT TCGTCTGCGG ACGGGCCTAT ACCAGGGGTT
TCCATTCGGG TTAAGGGAAC TACCATGGTT GCACAAACCG GTGGCGATGG AAAATATGCC
ATTAAAGCTG CAGCAAATGA TGTCCTGGTT TTTAGCTATG TGGGTTATAC TACTTTAGAA
AGAAATGTTG GCAGCAGCAG TACAATTAAT GTAAATCTTG TTGCTGATAA CAATGGGCTT
GATGAAGTGG TTGTGGTAGG GTTTGGCACG CAAAAGAAAG AAAGTTTGAC AGGTGCGGTA
TCTTCTGTAA ATGTAGAGAA AGTATTTGGC AACCGTCCTT TAGCCGATGT AGGAAGAGGC
TTGCAGGGTG CAGTTCCGGG CCTTTCAATA GTTGTGCCTA GTGGCGAGGT AGGATCAGAC
CCGATTATTA AAATTCGTGG CCAAATAGGA TCGATCGTAG GTTCGAACAG TCCACTAATA
TTAGTCGATA ACGTAGAAAT TCCAAGTATT CAATATGTAA ATCCAAATGA TATAGAGAGT
ATAAGCGTAT TAAAAGACGC GGCCTCGAGT GCGATTTATG GTTCAAAGGC CGCTTTTGGC
GTAATCCTGA TCACGACAAA AAAGGGGGCA AAGGTAGATG GAAGTAGGGT TACTTACTCG
AATAATTTTG TATGGCAATC TCCATTTAAA CCCATTGATA TTGCTGGAAT TGACGGTTTG
GAATATACAT TGGATGCTCA TGAAAACATG AAACAACCTG GTCCTGCAGG GGGGTTCTGG
CGTATAGACA GAACGAGTTT CGGTAAGATC AAAGAATGGC AGGCAAAATA TGGTGATGTG
GTTGGCAACA ATGACCCTAT TGTGTATGGT CGTGACTGGT TTTGGGACGG AGCCCAAAAA
TTCGGCTATA GAATTTATGA TCCTGTAGAA GCCATGATAA AAGATCATGG TTTATCTCAA
ATTCATAACC TTGGCTTAAA CGGGAAAAGC GGGAATACAA GTTATAATTT AAGTGTTGGG
TATTTGGGGC AAGAGGGTAT GATGAAACCT GCCAAGCATG ATGATTACCG GAGATTTATC
CCGGCATTAA CTTTGTCCAC TAAAGCGACT GACTATTTAA CTGTTCGCGG TGGAGTAAGG
TATGCAGATG CAACAAAGCG GAATCCTTAT TCATTAAATG TAGATGCTTT TACAGCAGAT
CCCTGGTTAT ATCTTTACCG TTGGAGTCGT TTATTTCCAA TAGGTGTGCA GGAGCAGGGT
GAAGATATTA TAGACCCTGC CTTTTCTGCC AGGATGTCGA ATGATCAGAT CCGTGATGAA
AAGTATTTGA ATATGAATTT AGGTACTACA ATCAATATCA CCAAAGCCTG GGATGTGCAA
GCCGATTATG CATATAGTAC AGAAAATAAT CTATTAACCT ATTCTGTTCC TTATGTACAG
GGACGTACTA CCTGGTATGG TGTTGAGACG CTTAGAGACG CAAACGGGCA AGTGTATGTT
GATGAAAACG GCAATATTAC AGATTCAGGA GGCATGCCGG CTTATCGTTT TCCGTTAACG
GATCATACCC TTAAGGCAAA TACTTCTTTC TCACAAAATA ATTATAGGTC AAAAAGAAGT
ACATTTAATG TGCTTACAAA TTACAATTTG GATTTAGGTA ATCATCAATT CAAGTTTTTG
CTGGGTAGTA ATATCGTTGC TTTTGACTAT TCCAGTCAAT TCTCTTATAG AAGTAACTTA
TTAAACAATG ACAATCCGCA ATATAATTTT GCTCTTGGCG GAACTGAAAA ATCAGGTGGA
GGTGCGAATT GGGATTCACA AGCAGGATTT TTTGGAAGAA TCAATTATGC CTACAAAGAC
AAATATCTTT TTGAAGCTAC TTTGAGACGC GATGGGAGCT CGAAATTTCC AACGCATTTG
AGATGGAGAT CATATCCCGG GGTTTCTGGA GGTTGGGTTA TATCTAACGA GAATTTTATG
GAATCGATAA AACCTGTATT GAGTTTTGCC AAACTTCGTG CATCCTGGGG TTCTATTGGA
GATCAATTAG TGCCTAATTC CCTGTATTTA CCAGTAATGG ATCCATTCAA AAGCTCATGG
TTAAATAGTT CTGCCAACCC TTATTATTAT TTGGCTACAC CTGACCCTGT CTCGGGGGAC
GTTTCATGGC AAAATATTGA GCATATGAAC CTGGGGGTTG ATCTTCGATT CTTTAATAAT
AAGTTGGGCA TTACAGCTGA AGTGTTTCAG CGGAACACCA ACGATATGAT TATGGGAGGT
GATGCACTGC CTGCTACCTT TGGTGCAAGT GCCCCTGAGG GTAATTATGG AAACTTGAGA
ACCCGGGGAT GGGAATTGAA TATAGATTTT AACCATCAAT TCGATAATGG GCTCCGCTTA
AGTATAGATG CTAATCTTTC TGACGCTGTG ACTATTATTA CAAAAGGCCC TGATTATAAA
AATTCCTGGG AAAATAGACT TCTAAGTTCA ACTTTTTCTA CAGGACGAAG ATATGGTGAT
GTATATGGTT TTGTAACCGA CCGGTTATTT CAAGCGGATG ATTTCGTGTA TGATGCTAAC
GGTAAGTTTG TGCAAACCAA TATTGTATAT AATGGAACCA GTAAAACAAC TAATAAACTT
GCTGGGGATA ATCCTGTTTA TCAGACCTAT TTTGAAGATG GTAACCAGAC CTTGCTGATT
AGCCCTGGAG ATGTGAAGTT TAAGGATTTG AATGGGGATG GCTACATCGA TGCCGGAAAA
GGCACCAATG GTGATCCTGG TGATCGGGTT GTAATTGGAA ATATCACACC AAGGTACCAA
TATGGCTTTC GTTTAGGTGC CGACTTCAAA GGATTTGATT TATCCGTTTT CTTTCAAGGC
GTGGGTGAAA GAAAAATTTG GGGTAGCGGA CAGTTGGCTA TACCTGGATA TTTCGCCAAA
GAGGGCGCAA TGCCACAAGC AATTGCCGGG GATTACTGGA AACCTGATCG TACTGGAGCG
TTTTATCCAA GGGCCTGGAA TATGAACGGT GCCAATGAAG GATATGTGAT GAGAACTCAA
AGTAAATATA TGCTGGACAT GTCTTATTTA AAAATAAAGA ACATTACTTT CGGGTATAAC
CTGCCTGCTT CAGTGCTTAA GAAAATTAAG CTCGCTAATG CAAGGGTTTA CATTTCCCTG
GAGAACTTTA TTACGTTTGA TAATTTGAGA GGATTGCCGA TTGATCCAGA AGCTATTTCA
GGATATTCTA TATTACGTTC TGAAGGAAAT TATAATTTAG GCCGTACAGG TACCTCAAAT
CCTGCATTTA AATCGGCTTC TGCAGGACTT CAAATTGGTT TTTAA
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| Protein sequence | MKKKLLILFL STFLLAVQAI AQQITITGTV SSADGPIPGV SIRVKGTTMV AQTGGDGKYA
IKAAANDVLV FSYVGYTTLE RNVGSSSTIN VNLVADNNGL DEVVVVGFGT QKKESLTGAV
SSVNVEKVFG NRPLADVGRG LQGAVPGLSI VVPSGEVGSD PIIKIRGQIG SIVGSNSPLI
LVDNVEIPSI QYVNPNDIES ISVLKDAASS AIYGSKAAFG VILITTKKGA KVDGSRVTYS
NNFVWQSPFK PIDIAGIDGL EYTLDAHENM KQPGPAGGFW RIDRTSFGKI KEWQAKYGDV
VGNNDPIVYG RDWFWDGAQK FGYRIYDPVE AMIKDHGLSQ IHNLGLNGKS GNTSYNLSVG
YLGQEGMMKP AKHDDYRRFI PALTLSTKAT DYLTVRGGVR YADATKRNPY SLNVDAFTAD
PWLYLYRWSR LFPIGVQEQG EDIIDPAFSA RMSNDQIRDE KYLNMNLGTT INITKAWDVQ
ADYAYSTENN LLTYSVPYVQ GRTTWYGVET LRDANGQVYV DENGNITDSG GMPAYRFPLT
DHTLKANTSF SQNNYRSKRS TFNVLTNYNL DLGNHQFKFL LGSNIVAFDY SSQFSYRSNL
LNNDNPQYNF ALGGTEKSGG GANWDSQAGF FGRINYAYKD KYLFEATLRR DGSSKFPTHL
RWRSYPGVSG GWVISNENFM ESIKPVLSFA KLRASWGSIG DQLVPNSLYL PVMDPFKSSW
LNSSANPYYY LATPDPVSGD VSWQNIEHMN LGVDLRFFNN KLGITAEVFQ RNTNDMIMGG
DALPATFGAS APEGNYGNLR TRGWELNIDF NHQFDNGLRL SIDANLSDAV TIITKGPDYK
NSWENRLLSS TFSTGRRYGD VYGFVTDRLF QADDFVYDAN GKFVQTNIVY NGTSKTTNKL
AGDNPVYQTY FEDGNQTLLI SPGDVKFKDL NGDGYIDAGK GTNGDPGDRV VIGNITPRYQ
YGFRLGADFK GFDLSVFFQG VGERKIWGSG QLAIPGYFAK EGAMPQAIAG DYWKPDRTGA
FYPRAWNMNG ANEGYVMRTQ SKYMLDMSYL KIKNITFGYN LPASVLKKIK LANARVYISL
ENFITFDNLR GLPIDPEAIS GYSILRSEGN YNLGRTGTSN PAFKSASAGL QIGF
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