| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4036 |
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| Symbol | |
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| ID | 8255170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4879252 |
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| End bp | 4881291 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937700 |
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| Product | excinuclease ABC, B subunit |
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| Protein accession | YP_003094289 |
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| Protein GI | 255533917 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.545808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTC AAATCGTTTC AGATTATAAA CCAACCGGAG ATCAGCCTGC TGCGATTAAA
CAACTGGTTG AAGGTGTAAA CAACGAAGAT CATTATCAGA CTTTACTAGG GGTGACCGGT
TCGGGCAAGA CCTTTACCAT AGCGAATGTG ATACAGCAGA CCCAGAAACC CACACTGATC
CTGAGCCATA ATAAAACACT GGCAGCACAG CTTTATGGGG AATTTAAACA GTTTTTTCCG
GAAAATGCAG TGAACTATTT TGTTTCTTAT TATGATTATT ACCAGCCTGA AGCTTTCATT
GCCAGCAGCA ATACCTATAT AGAGAAAGAT TTAAGTATCA ATGAGGAAAT AGAGAAATTG
CGGCTGCGGA CGACTTCTGC CCTGATGTCG GGCCGGAGGG ATGTCATCGT GGTCTCTTCT
ATCTCCTGTA TTTATGGTAT GGGCAATCCG GAAGATTTTT CGAGATCGGT ATTCCGCTTT
TCGGTGGGGT TACGGATTTC AAGGAATTCC TTTCTGCATA GCCTGGTGGA GATCCTGTAT
GCCCGTACCA CCACTGATTT TAAGCGCGGT ACTTTCAGGG TAAAAGGCGA TACGGTTGAT
ATTTTTCCGG CCTACCTGGA TAATGCTTAC CGTGTTTCTT TTTTTGGGGA TGACATTGAA
GCGCTGAGCG TGATAGACCC GGTTACAGGA AAGACACTGG AAAAGCTGGA AGACATGGCG
ATCTATCCTG CCAATTTGTT TGTCACACCT AAGGAAAGAT TTAATTCATC GATATGGGGG
ATACAGGAAG AACTGGAGAT CAGGAAGAAC CAATTGATTG GCGACCGGCA TTTGCTGGAA
GCAAAGCGGC TGGAAGAAAG GGTGAACTTT GATATAGAGA TGATGAAGGA ACTGGGCTAT
TGCTCAGGTA TAGAAAACTA CTCCCGCTTT TTTGACGGGA GGGCGCCGGG AATGCGGCCC
TTCTGTTTGC TGGATTACTT TCCGGATGAT TATTTAATGG TGATTGATGA AAGCCATGTT
ACGGTACCAC AGATCAGGGC GATGTATGGT GGCGACAGGT CGCGGAAAAT GTCGCTTGTA
GAATACGGGT TCCGTTTGCC ATCGGCCCTG GACAACAGGC CCCTGAACTT TGATGAGTTT
GAACGTCTGG CACCACAGAC CATTTATGTA AGTGCTACCC CGGCAGATTA TGAATTGCAG
AAATCGGAAG GAATTGTGAT TGAACAGGTG ATCAGGCCTA CAGGTTTACT GGATCCTTTG
ATTGATGTGC GGCCGGCAGT TAACCAGGTG GATGACCTGC TGGATGAAAT TGACAAGACC
ATTAAGCTGG GAGACAGGGT ACTGGTAACT ACACTGACCA AAAGGATGGC AGAGGAGCTG
ACCAAATATA TGGACCGGCT GAACATCAAA TGCCGTTATA TCCACTCGGA AGTGAAAACG
CTGGAAAGGG TAGAGATCTT ACGGGGGCTG CGCCTGGGTG AATTTGATGT TTTGATCGGG
ATTAACCTGT TGCGGGAGGG GCTTGACCTG CCGGAAGTAT CGCTGGTAGC TATTCTGGAT
GCCGATAAGG AAGGCTTTTT GCGTTCTGAC CGTGCGCTGA TCCAGACCAT TGGCCGTGCA
GCAAGGAATG ACAGGGGACG GGTGATCATG TATGCAGACA ACATGACCGA TTCGATGGAA
CGGACGATTG AGGAAACCAA CAGGCGGAGG GAAAAGCAGG TGGCCTATAA CCTGGAGCAT
GGAATTGTAC CTAAAACGGT TGGTAAGAGC AGGGAGGCGA TAATGGAGCA GAGCTCGGTA
CTGGACTTCT CGTCGGGTGA GCGCAAGCGG GCAAAACCTT ATGTGGAGGT AGATGAGGTG
AGCATTGCTG CTGATCCTGT TGTGCAGTAC ATGACCAAAC CGGAAATGCA GAAATCTATT
GATAAAACCC GTAAGGAAAT GGCTAAGGCA GCAAAAGACA TGGACTTTTT ACTTGCAGCC
AGGTTGCGTG ACGAGATGTT TGCAATGGAG AAATTATTTG AAGAAAAATT TAGTAAGTAA
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| Protein sequence | MKFQIVSDYK PTGDQPAAIK QLVEGVNNED HYQTLLGVTG SGKTFTIANV IQQTQKPTLI
LSHNKTLAAQ LYGEFKQFFP ENAVNYFVSY YDYYQPEAFI ASSNTYIEKD LSINEEIEKL
RLRTTSALMS GRRDVIVVSS ISCIYGMGNP EDFSRSVFRF SVGLRISRNS FLHSLVEILY
ARTTTDFKRG TFRVKGDTVD IFPAYLDNAY RVSFFGDDIE ALSVIDPVTG KTLEKLEDMA
IYPANLFVTP KERFNSSIWG IQEELEIRKN QLIGDRHLLE AKRLEERVNF DIEMMKELGY
CSGIENYSRF FDGRAPGMRP FCLLDYFPDD YLMVIDESHV TVPQIRAMYG GDRSRKMSLV
EYGFRLPSAL DNRPLNFDEF ERLAPQTIYV SATPADYELQ KSEGIVIEQV IRPTGLLDPL
IDVRPAVNQV DDLLDEIDKT IKLGDRVLVT TLTKRMAEEL TKYMDRLNIK CRYIHSEVKT
LERVEILRGL RLGEFDVLIG INLLREGLDL PEVSLVAILD ADKEGFLRSD RALIQTIGRA
ARNDRGRVIM YADNMTDSME RTIEETNRRR EKQVAYNLEH GIVPKTVGKS REAIMEQSSV
LDFSSGERKR AKPYVEVDEV SIAADPVVQY MTKPEMQKSI DKTRKEMAKA AKDMDFLLAA
RLRDEMFAME KLFEEKFSK
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