| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4021 |
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| Symbol | |
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| ID | 8255155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4863874 |
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| End bp | 4865127 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937685 |
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| Product | L-fucose transporter |
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| Protein accession | YP_003094274 |
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| Protein GI | 255533902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease
[TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAA ATAAATACCT CTTTCCTTTT ATCATGATCA CCTCATTGTT CTTTATGTGG
GGTTTTGTAC ATAACCTGGA CCCGGTGCTG ATCCCACACT TAAAGCGTTC ATTTAGCCTG
AGTACTTTAC AGGCCTCGCT GGTAGATTCT GCGGTATTTA TAGCCTATTT TGTGATGGCC
TTACCAGCAG GCTTCCTTTT AAAGAAATAT GGATATAAGA AGGGCATCAT TATCGGGCTT
GCTTTTTTTG CCTTAGGCTC ATTCTTATTT ATTCCTGCGG CCAATACACA GTTGTATGTG
TTCTTTTTGG GCGCATTGTT TATCATCGCC TGTGGCCTTA CGATATTGGA AACGGCTGCT
AATCCTTATG CTTCGTTGCT GGGGCCGCCG GAAACGGCCA CTTTCCGTTT AAATTTTGCA
CAGACTTTTA ACGGGCTTGC AGCAGCAATG GCGCCAATTA TTGGGGTGCG TGTAATTTTA
ATCAAAGGAC TTTCGGACGA AGAATTAAGT ACGATGACGG AATCGGCAAA GCAGCTGGCC
CTGGCGTCGG AGGCTTCTTC TGTAAAGACA CCTTATCTGA TTTTAGGAAG CATTATCCTG
GTTATCGCTG TGATATTTCT TTTCCTGAAA CTTCCGGAGA TCAAGGAAGA AGAGGATATT
AAAGCTGAAA AGACAGGGAT ATTGCATGCT TTGCGCCACA AACATTTATC CTGGGCGGTT
GCTGCGCAAT TTTTTTATGT AGGTGCGCAG GTTTGTGTAT TTAGTTTTTT CATCCTTTAT
GCTACCGACG TTGCAGGGAT CAGTCAAAAG TCGGCCGGAG ATTATGCCGG TGGTGTGGGA
CTGGCATTTC TGCTGGGGAG GGTATTAGGT ACATTTCTGA TGAAGTTTGT TAAGGCTGAA
TTGCTGCTGA CAATCTATTC ACTGATCAAT GTGCTGTTGT GTATTGTTGC GATTACCGCG
GGAGGTACGC TGGCACTGTT CACTGTGATC GGCATCGCAT TTTTCATGTC GATCATGTTT
CCGACCATTT TCTCGCTGGG GATCAAAGAC CTGGGGAGTG ATACCAAGCT GGGCAGCAGT
CTGATCATCA TGTCTATCGT GGGCGGTGCT GTTTTGCCAC CTGCTATGGG CTATATCAGC
GATGTGACGC ATAACATTCA GACCGGATAC ATTGTGCCTT TAATTTGTTT TGTAGTGGTG
TTTATGTTTG GTTTAAAGGG CCATAAAGTT ATTAAAAGTG TAAAATATGA ATAA
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| Protein sequence | MSKNKYLFPF IMITSLFFMW GFVHNLDPVL IPHLKRSFSL STLQASLVDS AVFIAYFVMA
LPAGFLLKKY GYKKGIIIGL AFFALGSFLF IPAANTQLYV FFLGALFIIA CGLTILETAA
NPYASLLGPP ETATFRLNFA QTFNGLAAAM APIIGVRVIL IKGLSDEELS TMTESAKQLA
LASEASSVKT PYLILGSIIL VIAVIFLFLK LPEIKEEEDI KAEKTGILHA LRHKHLSWAV
AAQFFYVGAQ VCVFSFFILY ATDVAGISQK SAGDYAGGVG LAFLLGRVLG TFLMKFVKAE
LLLTIYSLIN VLLCIVAITA GGTLALFTVI GIAFFMSIMF PTIFSLGIKD LGSDTKLGSS
LIIMSIVGGA VLPPAMGYIS DVTHNIQTGY IVPLICFVVV FMFGLKGHKV IKSVKYE
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