| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4015 |
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| Symbol | |
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| ID | 8255149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4858597 |
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| End bp | 4859376 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937679 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003094268 |
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| Protein GI | 255533896 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.553576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGC AATTAAAAGA TAAAGTGGTC ATTGTTACCG GTGGCGCAAA AGGTATTGGA
GAAGGTATTG TAAGGGTACT GGCTAAAGAA GGGGCTATTC CCGTTATTGT TGGAAGAAAC
GAACAGGATA ACCTGAGACT TGCCAAGGAT ATCAGTGCAA ATGGCGGACA GGTTTTTCAG
GTAAGTGCCG AGCTGACCAA TCCTGCGGCA GCAGCAAAAG CAGTTGAAAT TGTTTTGGAG
AAATTTGGCC GGATTGACGG ATTGGTAAAT AATGCAGGTG TAAATGACGG TGTGGGGCTG
GAGAGTGGTA GTTATGAACG TTTTGTAGAC AGCCTGCACA AGAATGTGAT CCACTATTAT
CTGATGGCAC ATCATGCCTT GCCCGCATTA AAGGCTTCAA AAGGTGCAAT TGTGAATATC
GGTTCAAAGG TGGCGGATAC CGGGCAAGGT GGGACTTCTG CTTATGCGGC CTCTAATGGG
GCCAGAAATG CTTTAACACG CGAATGGGCC TTAGAGCTAC TGCCTTATGA GATTCGCGTA
AATGCGGTTA TTGTTGCAGA ATGTTATACA CCTTTGTACC AGACCTGGAT CAATTCAATT
CCGAATGCTG AGGAGAAACT GGCTTCGATT AAAGCCAGGA TCCCTTTTGG ACAAAGAATG
ACGACAGCGG AAGAGATTGC AAATGCAACG GTATTTTTAT TATCTGAAGC CTCCAGCCAT
ACAACCGGAC AATTGGTGTA TGTAGATGGA GGCTATGTGC ATTTAGATAG ATCTATCTAA
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| Protein sequence | MDLQLKDKVV IVTGGAKGIG EGIVRVLAKE GAIPVIVGRN EQDNLRLAKD ISANGGQVFQ
VSAELTNPAA AAKAVEIVLE KFGRIDGLVN NAGVNDGVGL ESGSYERFVD SLHKNVIHYY
LMAHHALPAL KASKGAIVNI GSKVADTGQG GTSAYAASNG ARNALTREWA LELLPYEIRV
NAVIVAECYT PLYQTWINSI PNAEEKLASI KARIPFGQRM TTAEEIANAT VFLLSEASSH
TTGQLVYVDG GYVHLDRSI
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