| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4011 |
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| Symbol | |
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| ID | 8255145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4851495 |
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| End bp | 4854854 |
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| Gene Length | 3360 bp |
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| Protein Length | 1119 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937675 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003094264 |
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| Protein GI | 255533892 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCAA TTCATGTATC AGTTCAAACT AAAACCAACG CAATGTATTA CAATTCTACT
CGTTTTGCAA GCCGGTGTGT TCCGGCATTT TATTCACCGT TTAATATTAA AAAATTAAAA
TTTTTTATGA AAGTGAACGC GGTCCTATTG ATGATCCTTT TATTTGCAGT CGGCAGCCTG
ACCGCCTCCA CCGGATCTGC CCAAACCCTT GCCGACGTAA AAGTCTCTGT CGGGATGAAC
AAGGGGACAC TTCGCAGCGC TTTTTCACAG ATAGAAAAGC AAACAGATTT CAGGTTTGCG
TATCGGAATG AGCTGATTGC GACCTTTAAA AATTTAAATA TCAGCGGAGA GACCCGTTCT
GTGAAGAGCA CACTGGATGA GCTGTTAAAA GGTACAGGAT TAAATTATAA GCAGCTAAAC
AACAGCATTA TTATTTTTAA GGAAGTGGCA GTTGCATCAA GTGCCGCTAG ACAGGACATT
TATATCAACG GTTTGGTAAC CGATGAGTAC AAGCTTCCCT TGCCGGGCGT ATCGGTAAAG
ATCAAGGGTA CAAATAAGGG GGTTACTACA AGTAATGCAG GTAGATATGT TATACAGGTA
CCTGATGAAA ATGCCATCCT TGTATTCAGT TATCTAGGTT ATGTGACTAC AGAGGCAACG
GTTAAAAACG GCCGCGCTAC GAATGTTTCT TTAAAGCCCG ATGTAGGCAC GCTGGATGAT
GTCGTTGTGA TAGGTTATGG AACGACCACC AAAAGATTGA ATACAGGTTC TGTATCATCA
ATTACAGCTA AAGATATCGC TAGTCAGCCT GTTTCCGATC CGCTTGCAGC CCTGCAGGGC
CGGGTTGCTG GTTTGGATAT TACAGGAACG ACTGGTTATC CGGGCTCAAG TTATAATGTA
CGTTTAAGAG GTACCAATTC TATCCTTGCT GGTAACAGTC CTTTATATAT TGTAGATGGA
ATTCCATTTA TCTCCGAACC AATAGATCAG TTTAGGGGAG CAAATGGCAA TAATAGTCCG
TTAAACAGTA TTAATCCTGC TGATATAGAA CGAATAGATA TTTTAAAAGA TGCAGATGCT
ACCGCAATAT ATGGATCAAG GGGCGCAAAT GGAGTGATTT TGATCAGTAC CAAAAAAGGT
AAGAGTGGGA AAACTGCCGT TGATGCCAAA GTGTATAGCG GCGCTGCTTT TGTAAATCAT
AAAATTGAAA TGCTGAATAC CCAGCAATAT CTTGCTTTAC GTAAAGAAGC TATTGCAAAT
GATGGAATAG CTGTAACAGA TGAAAGCATA CCCGACCTTA AAAAGTGGGA TCAGAATCTT
GACAACGATT GGCAGAAAAC GTTAATGGGT GGGACTTCAA AATTTACAGA AGCTCAACTT
TCTTTGTCAG GAGGATCGGA TCTGACTAAT TTCCTGGTGA GTGGTACCTA CCGTCGTGAA
GGTAATGTTA CACCTGGTGA TCAAAACTAT CAGCGCGGTG CGGTTAACCT GAGTATGAAC
CACAAGTCGG CAGATAATAA GTTTAACCTC AGCACTTCAT TAAAATATAC GGCAGACCTG
AACAAATCTT TTATTACGGA TCTCACGCAA TATTATAATC TTTCGCCAAA CTTTCCAGTA
TATGGACCTG ATGGTAAATA TTACTGGGTA GGGAATACAC AAAATCCAAT GGCTCTTTTT
GAAAGGGATT ATGAGTCGCA AACCAATAAC CTTTTTGGAA ATGTTCTGGC AAAATATAAC
ATTTTTAATG GTTTAAGTGC TCAGGTAAGT TTAGGTTATA ACCGTATGAC CTTAAAACAG
ACACAGACTG TTCCTGAGAT TTCTTCTAAC CCCTTAAATT ACACCGAAAG TGAGGCCTAT
TATGGGAATA GTGAATTGAA CTCTTATATT GTAGAGCCAC AGCTGGACTA TGTCCGTAAA
ATAGGAAAAG GGACTTTAAA TTTATTATTG GGGGGTACCT TTCAATCCAG CATTAACGAA
GGATTGAACC TTCTGGGATC TGGCTACCCG AGTGACGAAC AGTTAAAAAA CCCTAATGTT
GCTGTTAAGT TAGAATCGAG GAATTATAAT TATACCGACT ATAAGTATAC CTCTATATTT
GGACGTGCCA CCTACAATCT GGATGAAAAG TATATTGTAA ATGGAACTTT CAGACGTGAT
GGATCTTCCC GTTTTGGACC TGATAGAAGG TTCGGGAACT TTGGGGCTAT AGGTGTGGCC
TGGTTGTTTG CAAATGAATC ATTCATTAAA GATAACCTGG GTTTTTTAAG TTATGGTAAA
TTGAGGGGCA GTTATGGAAC AGTTGGTAAT GACCAGATCG GTGATTATGA ATATTATGAT
GGCTGGGGGG CATCAAGTTT TCCTTATGCA GGAAGCCCAA CGCTAAGCCC AAGCCGTTTT
TCAATTCCGA CATACCAGTG GGAAGTAAAC CATAAATTTG AAGTAGGACT TGAGCTTGGA
TTCCTGAAAG ACAGGATTTT AATGACTGCC AGCTACTACC GCAACAAATC TGGAAATATG
CTGATCAGTT ATCCTTTATC ACCACAATCT GGTTTTGAGG ACTATGTAGC CAATCTTCCG
GCAGAGCTGG AAAATAAAGG TTTTGAATTG GAATTAAATA CCGTAAATGT CAATGAAAAG
AACTTTAAAT GGAATACTTC CTTTAATCTT ACTATAGCAA AAAATAAGCT TTTAAAGTAT
CCAGGATTAG AAAATACCGC TCTGGCCAGC AGATACTTTA TAGGTCAGCC TATTGATGTG
ACTACAGGAT ATATTTTTGA CGGAATTGAT CCTCAAACAG GACTGGCTAA AATTAAAGAC
CTAAATAATG ACCAGGACAT TGATGATATA AGCGATTTTA CCTTTCTGGG TACAACCACA
CCTAAATTTT ATGGTGGGAT TATGAATAAG TTTAGTTATA AGAACTGGAG TCTTGATTTC
TTTTTCCAGT TTGTAAAACA GGAAGGCCCG TCATTAAATT ATGGTTATTT ATCTGTGCCT
TATGGTTTTA TGGTGAATAA AGATGTCAGC GCACTTGACA GATGGACCCC GGACAACAGG
CAAACCGATA TTCCAAAGGC AACGGCGAGT GCAAGTGGTG ATGCTTATGT TTCCTATAGT
CAGTGGAGAT TATCGAGTGC CAATTGGAAG GACGCTTCCT TTATCCGGTT AAAAAATGTG
GCTTTGCGTT ATAGCCTGGG TTCACTTGCA AAACGCCTTC ATGTTGGTAA CCTGACGGTA
TTTGCTCAGG GACAGAATTT GTTTACCATA ACTAATTATG ATGGTTTTGA CCCCGAGACT
AAAGGGTTGG CTATGCCTCC TTTGAGTATT TATACAGCTG GGCTACAACT ATCTTTTTAA
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| Protein sequence | MVSIHVSVQT KTNAMYYNST RFASRCVPAF YSPFNIKKLK FFMKVNAVLL MILLFAVGSL
TASTGSAQTL ADVKVSVGMN KGTLRSAFSQ IEKQTDFRFA YRNELIATFK NLNISGETRS
VKSTLDELLK GTGLNYKQLN NSIIIFKEVA VASSAARQDI YINGLVTDEY KLPLPGVSVK
IKGTNKGVTT SNAGRYVIQV PDENAILVFS YLGYVTTEAT VKNGRATNVS LKPDVGTLDD
VVVIGYGTTT KRLNTGSVSS ITAKDIASQP VSDPLAALQG RVAGLDITGT TGYPGSSYNV
RLRGTNSILA GNSPLYIVDG IPFISEPIDQ FRGANGNNSP LNSINPADIE RIDILKDADA
TAIYGSRGAN GVILISTKKG KSGKTAVDAK VYSGAAFVNH KIEMLNTQQY LALRKEAIAN
DGIAVTDESI PDLKKWDQNL DNDWQKTLMG GTSKFTEAQL SLSGGSDLTN FLVSGTYRRE
GNVTPGDQNY QRGAVNLSMN HKSADNKFNL STSLKYTADL NKSFITDLTQ YYNLSPNFPV
YGPDGKYYWV GNTQNPMALF ERDYESQTNN LFGNVLAKYN IFNGLSAQVS LGYNRMTLKQ
TQTVPEISSN PLNYTESEAY YGNSELNSYI VEPQLDYVRK IGKGTLNLLL GGTFQSSINE
GLNLLGSGYP SDEQLKNPNV AVKLESRNYN YTDYKYTSIF GRATYNLDEK YIVNGTFRRD
GSSRFGPDRR FGNFGAIGVA WLFANESFIK DNLGFLSYGK LRGSYGTVGN DQIGDYEYYD
GWGASSFPYA GSPTLSPSRF SIPTYQWEVN HKFEVGLELG FLKDRILMTA SYYRNKSGNM
LISYPLSPQS GFEDYVANLP AELENKGFEL ELNTVNVNEK NFKWNTSFNL TIAKNKLLKY
PGLENTALAS RYFIGQPIDV TTGYIFDGID PQTGLAKIKD LNNDQDIDDI SDFTFLGTTT
PKFYGGIMNK FSYKNWSLDF FFQFVKQEGP SLNYGYLSVP YGFMVNKDVS ALDRWTPDNR
QTDIPKATAS ASGDAYVSYS QWRLSSANWK DASFIRLKNV ALRYSLGSLA KRLHVGNLTV
FAQGQNLFTI TNYDGFDPET KGLAMPPLSI YTAGLQLSF
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