Gene Phep_4003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4003 
Symbol 
ID8255137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4834277 
End bp4835572 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content44% 
IMG OID644937667 
Producthypothetical protein 
Protein accessionYP_003094256 
Protein GI255533884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0386337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATA AATTAAAATC CGAGATCGCT CATTTTAAGG CACAATCGCA CAACTTTAAA 
GTGCTCACCT TAACCAATCT GATCTATAGC ATTGTTTTGC CTGTGATAGA TATTTTTGTG
GCGGCTTATG TAATGCGCAG TTCTAATGAC CCGGTAAAAG TGGTGGTATA TCAGCTTACC
ATTTATACTG GCATCCCTTT AACCTTCCTG ATCAATGGCT GGCTGCTGAA CCGCTTCCCC
ATTAAAGTAC TGTATTCATT GGGAATGGTG CTCAGCGCCA TTTCGATGAT GATCATGATG
TCGCTGACCA CTCTTGATAT TACGGGGATC GGTATTGCAG GCATTGTAAT GGGGATGTCT
TTTGGTTTTT ACTGGGCAAA CCGGGATTTT CTGGCCCTGG CTACCACAAA TGACGGTAAC
CGTAATTATT ATTATGGGCT GGAGACCTTT TTTTATACCA TTATTGCGGT AGTGATCCCG
GTGATGATCG GTTGGTTCAT AGAAGGCCTG GCAGGTACGG GTGATGCAAA GCTGGCTTAT
AAAATTGTTA CGGGCATTGT GTTTGTGATT ACACTCGCGG CTTCGGTGAT GTGTTTTACG
GGAAGGTTTA CCAATCCCAT CAGTAAGAAA TTCATCTATT TTAAGTTTGA TCCTTACTGG
TACAGGCTGA TGTTTCTGGC GGTATTAAAA GGGCTGGTCC AGGGCTTTTT GGTTACTGCA
CCAGCAATGC TGATTATGCT GCTGCTTGGA AAAGAGGGGG CACTGGGCAC GGCACAATCG
GTAGGGGCTG TTTTTGCAGC CATATTGATG TACATTATTG GTCGTAAAAC CGGTCCGCAG
CACCGTATAT ATGTATTTGG CACCGGACTG GTATTGTTTA CCATTGCCGC ACTGATTAAC
GGGATCCTGT TTAATGAAAC TGGTGTAATC CTGTTTATGC TGTTCCTTTT GCTGGCTAAA
CCTTTGCTGG ACCTGGCTTA TTTTCCTATA CAATTTAGTG TGATCGACAT TCTGACTAAA
AAGGAAAAGA GAAGTGAATT TGCCTATATC CTAAACCATG AGGCGGGCCT TTATATTGGC
AGGCTAACTG GAGCGGGTAC TTTTTTGTTA CTGGCCTATT ATTTTTCGAA TGAGGTTGCA
CTGCGTTATG CCATCATTAT TGTGGCGGTA TTGCAGCTCA GTTCTTACTG GGTGGCAAGG
GGCATCATTA AAAAGGGTAA AATTATGAAT GAAGGCTTGG AACTGGGCGA AAAGAGCCTT
GCAGAAACAG TTAACCCAAG CCATTCCATT GCTTAG
 
Protein sequence
MIHKLKSEIA HFKAQSHNFK VLTLTNLIYS IVLPVIDIFV AAYVMRSSND PVKVVVYQLT 
IYTGIPLTFL INGWLLNRFP IKVLYSLGMV LSAISMMIMM SLTTLDITGI GIAGIVMGMS
FGFYWANRDF LALATTNDGN RNYYYGLETF FYTIIAVVIP VMIGWFIEGL AGTGDAKLAY
KIVTGIVFVI TLAASVMCFT GRFTNPISKK FIYFKFDPYW YRLMFLAVLK GLVQGFLVTA
PAMLIMLLLG KEGALGTAQS VGAVFAAILM YIIGRKTGPQ HRIYVFGTGL VLFTIAALIN
GILFNETGVI LFMLFLLLAK PLLDLAYFPI QFSVIDILTK KEKRSEFAYI LNHEAGLYIG
RLTGAGTFLL LAYYFSNEVA LRYAIIIVAV LQLSSYWVAR GIIKKGKIMN EGLELGEKSL
AETVNPSHSI A