| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3998 |
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| Symbol | |
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| ID | 8255132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4828752 |
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| End bp | 4829360 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937662 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003094251 |
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| Protein GI | 255533879 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATCATTT TAGAAGATTC TTATCAAAAT AACTTACTTG TCCGTCTTAA AACGGGTGAT
GAGACTGCCT TTAATGGGAT TTATGAGGCT TACAGCAAAC CCATGTACCT TAAAATCCTG
AGCATGACCA AGGATAAGGA CGTTGCCGAT GAGTTGTTAC AGGAACTTTT TATCCGGCTG
TGGGATAATA AGGAAAAAAT TATTCCCGGC AAATCCTTTC AATCCTACCT CTATACCATC
ACCAGGAACC TGGTTTACAA TTATTTCAGG AAGGTAGCAT CCGACAATTC ATTGATTGAG
CAGATGCTGC TCCGGGGCAC TGACCATTAC CTTAATGCTG AAGAAGTTTT ATTGAGCAAA
GAGAGTGCAG CACTTCTGAA AAATGCAATC GACCAGCTTT CTCCTCAAAG AAAAATGGTA
TTCGAGCTCT GCAAAATCGA CGGTAAAAGT TATGATGAGG TTAGCAAGCT CCTTGGCATC
TCTGTTGCCA CCGTAAATAG CCATATCACT AAATCTATGC AATTGATCAA AGCATACCTT
ATCAAACATC AGGATACAGG CCTCTTGTTT ATTGGCCTGT ACCTGGCTTC AGATCTGATT
GGCAAATAA
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| Protein sequence | MIILEDSYQN NLLVRLKTGD ETAFNGIYEA YSKPMYLKIL SMTKDKDVAD ELLQELFIRL
WDNKEKIIPG KSFQSYLYTI TRNLVYNYFR KVASDNSLIE QMLLRGTDHY LNAEEVLLSK
ESAALLKNAI DQLSPQRKMV FELCKIDGKS YDEVSKLLGI SVATVNSHIT KSMQLIKAYL
IKHQDTGLLF IGLYLASDLI GK
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