| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3965 |
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| Symbol | |
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| ID | 8255099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4771461 |
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| End bp | 4773455 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937629 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094218 |
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| Protein GI | 255533846 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00142425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA AATTATATAT CTGTATTGTT GTAGCCCTGG TTTGTATGGC TACATCTTGT
TCTAAATTTT TAGATACTGT ACCAAAGGAT ACGATCACCA GTTTAAATTA TTACGAGACT
GAACAACAGC TCAATTCGGC ATTGGCCGGG GTATTCCAGA CCTTGACAAA AATTTATGGA
CACAGCTTTC AGGGGGTGAT GTCATTGGAC GGAGATGAGG GTTTTTACAA CCGTTCTGCA
CAGAATACGG GCATTGCTGT AAACCTGGTT ACCACTTCTG AAACTAACGT AACTAATGTA
TGGACCGCAT TGTATAACGG AATTGAAAGA GCAAACCTAT TGCTGGCCAA TATCAATAAA
CCTACAATGA CTGAAGCAAA CCGGTCTGTC ATTAAAGGAG AAGCTTTGTT TTTAAGGTCC
TACTTTTACT TTTTACTGGT GAGCTACTGG GGAGATGTGC CTTTGCTGCT GGAACCTACT
TCTTCTGTTG CACAAACTAA TAATCCCAGA ACACCTTCAA AAGAAGTATA CGAGCAGATC
ATCAAAGATA TGACCGAAGC GGAAAGTCTG GTCCCTGATG TAAGGCAGGT CAGCAACGCA
GGTCACATCA ATAAGTCTGC CGTACGCGGT TTGTTGGCCA GGGTGTGTTT ATATATGGCC
GGAGATCCTG TAAAGGATGT GTCCAAATAC GAAATGGCTA AAATCTGGGC AAAAAAGGTA
ATAGATGACG GCTATCATAG CCTTAATCCG GATTACAGGC AGGTATTCAT TAACATGAGC
CAGGATAAAT ATGACCTTAA AGAAAGCATC TGGGAGGTTG AGTTTTACGG TTATAGTTCA
GATGGTTTCA ATGCCACCGG GAAAGTTGGT ATTCATTATG GAATTTCCCA CGGTGGTCAG
GACCCAAATT ATGGTTATTG CTTCGGATAT GTAGCGGTCA CACCAAAGTT ATATTTTTCC
TATGCAAAAG GTGATTGGAG AAGGGACTGG AACATCGCCC CATACACTTT GTCGTCGACC
AATCCTGCCA CTAAAACGTA TCGCCCAATC TATCCTACAG CCATGCAGGC AAGTGAAAGA
AGTGTAGCTA AATGGAAAAG GGAATATGAA ACCGTTTATC CAAAAGAGCA AGGAGGTAAC
TCGGTCAATT ATCCGCTGCT GCGCTACTCA GATGTATTAC TGATGTATGC AGAAGCAGTA
GCAAGTCAAA ATGGAACTGT ACCAGATCAG GATGTATTGG ACCAGACTGT AAATCAGGTA
AGGAGAAGAG CGTATGGAAA CCTGTTGCCA AATAGAGAGC TGATTGATAC CATTACTATT
TCTACTGCAG GTTCAGGATA TACCTCAGCG CCGGCAGTTA CAATTTCTGG TGGTGGCGGT
GCAGGTGGCG CTGCTGTTGC CACAGTTGCA ACAAGTGGAA CCAGAGCGCT AAACGCCATC
TATCTGGAGA ACAGAGGTGG TAATTATAAT TTAACACCAA CCATTACTAT TGGTGAATCC
TGGATGCCAA ATGTCTTATA CGCTGCAGGT AAACAAGTTT ATAACGACAA TAAGCTGTAT
ACTGTAACTA CAGCAGGTAC AACCACCGCT ACACCACCAA CACAAAGCTC CGGAGCATCT
GCAGCAGCCA CTACCGGTGC TGTGTTTACC TATGCAGGAG TACAAGCAAA GGCCGCTGTA
ACCCTGACCA GGTTATCTGA ATTTAAAGGT GACGTAAAAA CTGCGGGCTT TGCTGACTAT
GCCAGATTTA TGGAGTTCCT GAAAGCGGAG CGTTCAAGAG AATTGGCATT TGAGGCCATG
AGGAAGAGAG ATCTGGTACG CTGGGGTGAT TACTACCGTG TGATGAAACA AATTGCGCTG
GATTTTGCTG CTCTGGGATC AAGGGCCTTT GGTGGAAAAG CAGGGGAAAA CACCTCAGAG
AGAGATGTTT TATGGCCTAT ACCTGATGCT GAAACTACCG TCAATAAGGC AATCGGTCAG
AATCCAGGTT GGTAA
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| Protein sequence | MEKKLYICIV VALVCMATSC SKFLDTVPKD TITSLNYYET EQQLNSALAG VFQTLTKIYG
HSFQGVMSLD GDEGFYNRSA QNTGIAVNLV TTSETNVTNV WTALYNGIER ANLLLANINK
PTMTEANRSV IKGEALFLRS YFYFLLVSYW GDVPLLLEPT SSVAQTNNPR TPSKEVYEQI
IKDMTEAESL VPDVRQVSNA GHINKSAVRG LLARVCLYMA GDPVKDVSKY EMAKIWAKKV
IDDGYHSLNP DYRQVFINMS QDKYDLKESI WEVEFYGYSS DGFNATGKVG IHYGISHGGQ
DPNYGYCFGY VAVTPKLYFS YAKGDWRRDW NIAPYTLSST NPATKTYRPI YPTAMQASER
SVAKWKREYE TVYPKEQGGN SVNYPLLRYS DVLLMYAEAV ASQNGTVPDQ DVLDQTVNQV
RRRAYGNLLP NRELIDTITI STAGSGYTSA PAVTISGGGG AGGAAVATVA TSGTRALNAI
YLENRGGNYN LTPTITIGES WMPNVLYAAG KQVYNDNKLY TVTTAGTTTA TPPTQSSGAS
AAATTGAVFT YAGVQAKAAV TLTRLSEFKG DVKTAGFADY ARFMEFLKAE RSRELAFEAM
RKRDLVRWGD YYRVMKQIAL DFAALGSRAF GGKAGENTSE RDVLWPIPDA ETTVNKAIGQ
NPGW
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