| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3943 |
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| Symbol | |
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| ID | 8255077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4743441 |
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| End bp | 4744325 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644937607 |
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| Product | formyl transferase domain protein |
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| Protein accession | YP_003094196 |
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| Protein GI | 255533824 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0655698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT ATAAGTTCGG TATTTTAGCT AGTGGGAGAT TAGGATTTAT TTGTCTAAAT
GAAATTCTTA AGCAGGTTTT TGTTGGTTTT GTATTCACAG ACTCTAAGTC TAATAATATC
ATAGATTTAT GCAATAGCAT TAATTTACCA GTATTTGTAG GAAATCCTAG AAATGAGAAG
TCAGAGTTAT TTTTAAAACA ATTTGATGTA GATTTTATTT TATCTATTAA TTACTTATAT
CTGGTTGATG AGTCTATCTT TGATTTCCCT AAAGGATATG CGATTAATTT TCATGGTTCT
TTACTGCCGA AGTATCGAGG GAGGACTCCT CATGTTTGGG CAATAATAAA TAATGAGATT
CAAACTGGTA TTACAGCGCA TTTAATCTCA AAAAATTGCG ATGAGGGAGA TATTGTATAT
CAGGAGGTTA TTCCCATTGG TCCTGATACA ACGGGAGGGG ATATTTTAGC CGAATTTGAA
AGACGGTTTC CGATTTGTAT TAAATCAGTA ATAGAAAGTA TTGAAAATGG CTCAATAAAA
CCAGTTGCCC AAAATAATGA GCACGCAACT TATTATGGAA AGAGAAGTCC TAAAGATGGA
ATGATAAATT GGAATTGGCA AAAAGAAAGG ATAAAAAATT GGGTGAGGGC ACAGGCAAAA
CCTTATCCTG GAGCATTCTC ATATGTTAAC GATAAAAAAA TTATTATTCA TAAAGTGAAA
TTTGTTGATA TAGGTTTTGC TGATAACGAT GTTAATGGAG AAGTAATTAG TGTACAAGAA
GGAATTGTTG TAAAAACACA AAATGGAGCC CTAATGCTTA TAGATTATGA AGTGGAGGGA
TCCTTTAATT TTGAAATAGG AGATATATTA TATGCAAGAG ATTAA
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| Protein sequence | MSNYKFGILA SGRLGFICLN EILKQVFVGF VFTDSKSNNI IDLCNSINLP VFVGNPRNEK
SELFLKQFDV DFILSINYLY LVDESIFDFP KGYAINFHGS LLPKYRGRTP HVWAIINNEI
QTGITAHLIS KNCDEGDIVY QEVIPIGPDT TGGDILAEFE RRFPICIKSV IESIENGSIK
PVAQNNEHAT YYGKRSPKDG MINWNWQKER IKNWVRAQAK PYPGAFSYVN DKKIIIHKVK
FVDIGFADND VNGEVISVQE GIVVKTQNGA LMLIDYEVEG SFNFEIGDIL YARD
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