Gene Phep_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3922 
Symbol 
ID8255056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4721452 
End bp4722030 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content31% 
IMG OID644937586 
Producthypothetical protein 
Protein accessionYP_003094175 
Protein GI255533803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.421619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00653437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAAATA GGATTTTAAC AGTCGATGAT TGTAGAGAGT TGGCAATGCT TCATAATTTA 
GCGTTTAAAA ATTTCTTTCT AACTTCTTTA GGGACTAATT TTTTGTTTAA ATTTTATAAA
GCTATTTTAA TGGATAAAAA TGGAATTGGC GTAGGAGCTT TTGAGGAAAA TAAGCTTATT
GGATTTGCAA TTGGTGCCAA GCAGGTTCGA GGATTCTATA AAAACATAGC AAAGAAAAAT
CTCTTTTCAT TATCTTTTAG TGCTTTACCT CATTTTTTTG CGAACCCAAG ATTCTTGTTT
AGACTTATTG TTTCTCTACG CACGTCCAAC AGCAATACGG ATGGACCATT TCTGCTATCA
ATATGCGTGG ATCCATTGTC AGGGCGTAAA GGATTAGGAA CCGCACTTAT AGATATTTTT
GAACTGCAAA TTGGGCCCGG CATGACCTAT CGATTAATGA CAGATGAAAA AGATAATGAT
AAAGTAAATA GATTTTATCT AAAGAACGAA TTTATTTTAG AAAATGTAAT TATGCAAGGA
AATAGGACTT TAAATGTTTA TAAAAAAAAA ATAAGATAA
 
Protein sequence
MVNRILTVDD CRELAMLHNL AFKNFFLTSL GTNFLFKFYK AILMDKNGIG VGAFEENKLI 
GFAIGAKQVR GFYKNIAKKN LFSLSFSALP HFFANPRFLF RLIVSLRTSN SNTDGPFLLS
ICVDPLSGRK GLGTALIDIF ELQIGPGMTY RLMTDEKDND KVNRFYLKNE FILENVIMQG
NRTLNVYKKK IR