Gene Phep_3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3903 
Symbol 
ID8255037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4695706 
End bp4696923 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content42% 
IMG OID644937567 
Producthypothetical protein 
Protein accessionYP_003094156 
Protein GI255533784 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGGA TCACTTTTAT TACAACAGGA CAGCCTACTA CCAATCCCAG GCTGATTAAA 
GAGGCAGAAA CCCTACACAA TCTGGGTTAC CAGGTAAAGG TAATCTGTTG TTTTTATCAG
TCATGGGCCC AAAAATTTGA TCAGGAGATT ATTGATAGAA ATCCTGAGAT GTATATTTAT
TGCGGTGGCA CCCCATTACG CGATAAAATA CCCTACTTCC GCAGCAGGCT TCGTCAGAAA
ATATGCGTGC TCCTCTTCAG CTATATAAAA CGCATGCAAA TAGCCGAAAA TGCCATCAGC
AGGACGCATC GGGAGGCTCT TGCTATTGCC GGGCAAATAA AAACAGACCT TTATATCGCA
CATAACCTTG GGGCCTTGCC AACTGCAGTG CTGGCAGCAA AGAAAACAAA TGCCAGGGTA
GGATATGATG CCGAGGATAT GCATTCTGGC CAGTTTACCT CCAAAAAGGA TAAAACGTAC
CTGCTGAACA AATATATTGA AACCAAGTAT TTTAAGCATA CAGATTATTT TACTGCTGCC
AGTCCGCTTA TTGCCGCTTT CTATCACAAA TTATATCCTG ATCTGCAACC AGTGGTCATC
AACAATGTTT TCAGGAAGAC CAGTCTGAAC CTGAAACAAA ATTATAAAAC CGGTGGCTGT
TTAAAACTTT TCTGGTTTTC TCAAACAGTT GGCCCCAACC GGGGTCTTGA ACAAATCATT
AAAGCAATGG CTATTACAGC CCATCCTGTA CAACTCCATT TACTTGGCAA ATGTCCGGCT
GAATACAAAC TGAAAATACT TCAGCTTTTG AGCTTTCATA AGCTCCATAA AAACCAGGTC
CGGTTTCATG AGCCGATCCC CGCTGATGCA CTTTTCAATT ATGCAATAAG CTTTGATATC
GGTATGGCCT CGGAAACAGA CGTATCCTTA AACAGGGACA TTTGTCTTAC GAACAAAGTA
TTTACTTACA TCCAATGCGG ATTGGCCCTT ATTGCGAGTG ATACAAAGGC CCAAAAACAA
TTCATGCAGC AATATCCAGG CACGGGTAAA TTATATGATA AAAACAGTGC AGAATCATTG
GCCGATTGCA TAAATGCTTA CGCCGGCGAT CCTGGATCTT TATACCAAAA CAGATTAAAG
AATTATCACC TGGGCCAGAC GGTGCTCAAC TGGGAGACTG AAAGCCTTAA ATTTCTAAAG
GTGATTGCAA ATACTTAA
 
Protein sequence
MKRITFITTG QPTTNPRLIK EAETLHNLGY QVKVICCFYQ SWAQKFDQEI IDRNPEMYIY 
CGGTPLRDKI PYFRSRLRQK ICVLLFSYIK RMQIAENAIS RTHREALAIA GQIKTDLYIA
HNLGALPTAV LAAKKTNARV GYDAEDMHSG QFTSKKDKTY LLNKYIETKY FKHTDYFTAA
SPLIAAFYHK LYPDLQPVVI NNVFRKTSLN LKQNYKTGGC LKLFWFSQTV GPNRGLEQII
KAMAITAHPV QLHLLGKCPA EYKLKILQLL SFHKLHKNQV RFHEPIPADA LFNYAISFDI
GMASETDVSL NRDICLTNKV FTYIQCGLAL IASDTKAQKQ FMQQYPGTGK LYDKNSAESL
ADCINAYAGD PGSLYQNRLK NYHLGQTVLN WETESLKFLK VIANT