Gene Phep_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3889 
Symbol 
ID8255023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4680454 
End bp4681203 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content40% 
IMG OID644937553 
Productglycosyl transferase family 2 
Protein accessionYP_003094142 
Protein GI255533770 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATG TAAAAATTTC GTTGATAACT GTTTCCTATA ATGCCGAACT TACCATACAG 
CGATGTATAG ATTCTGTGAT CAGGCAGACC TATAAACATA TTGAGTACAT CATTATTGAC
GGTAATTCTA GCGATAAGAC CCGGCAGATT GTGCTGAACA ACCGCGCGCA CATTCAGCTT
TTCAGGTCAG AACCTGACCA TGGTATTTTT GATGCCATGA ATAAAGGTAT TTCTATGTGT
ACAGGAGATG TTATAGGTAT GCTGAATGCA GATGATTACC TGGATAATGA ACATGTGCTG
AATGAGATAG CCAGTTCTTT TATCAAAAAT GATCCTGATC TGCTCTATGC TGACCTGGAT
TATGTAAACA AGAATGGAAA GGTAATCCGC AGCTGGCGTT CCGGCCATTA CCGGCCCAAT
AAATTTAATT GGGGCTGGAT GCCACCCCAT CCAACTTTTT ATGTAAAAAG GGGGCTATTT
GACAAGTTTG GCCTATATAA TTTTAGCTAT GGAACCGCTG CAGATTATGA GCTGATGCTC
CGTTTCATGT ATTTAAACAG GGCGAAAGTT TTTTATTTAA ATAAAGTAAT AGTTAAAATG
AGTTTAGGAG GGGTAAGCAA CCAGAACCTG ACAAACAGGA TTAAGGCCTG GAGAAACGAC
CTTAAAGCCA TGAAGCAGCA CGGTATAAAT GTTCCTGTAT TTGGCCTGAT CATGAAGCCG
CTCAGAAAAA TAACCCAGTT TGCAGGATAA
 
Protein sequence
MLNVKISLIT VSYNAELTIQ RCIDSVIRQT YKHIEYIIID GNSSDKTRQI VLNNRAHIQL 
FRSEPDHGIF DAMNKGISMC TGDVIGMLNA DDYLDNEHVL NEIASSFIKN DPDLLYADLD
YVNKNGKVIR SWRSGHYRPN KFNWGWMPPH PTFYVKRGLF DKFGLYNFSY GTAADYELML
RFMYLNRAKV FYLNKVIVKM SLGGVSNQNL TNRIKAWRND LKAMKQHGIN VPVFGLIMKP
LRKITQFAG