| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3874 |
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| Symbol | |
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| ID | 8255008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4654484 |
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| End bp | 4656190 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937538 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094127 |
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| Protein GI | 255533755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.483678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTA AAAGATTTAT GTTAGGGTTG ATGGCAATTC TAACCACCTT TATGGGCTGT
AAGGATTACC TGGACAGGGA AATTCCAACT AATGTTAAGG ACGATCAGGT ATTTGTGAAC
TATGACCGCA TTTCACAGGC AGGATATGGG GCTTATGCCT TCCTTTTTAA TACCATTGGC
TATAACCGGA TCAATGGTGC CATGCTGGCC TCAGGTTGTG ATGAAGCCGA TCATGCAGAC
AATATTTCAA GTATTCAGCG GTTTAATACG GGCACCTGGA ATGCTACATT TAATCCTGAA
GATGTATGGG GACTGTTTTA CCAGGGCATC AGGCGGGCAA ATCTTTTTCT GGAAGAATCG
GCAGATTTTA AAAACCTGAT CTACAGAGAT ACCATTAATG TAACCAATAA AGACCTTTAT
AAATACAGAG TACGGGATTT AGAATGGTTA AGGGCCGAAA ACCGCTTTTT ACGGGCATAT
TACTATGCTG AGCTTATTAA ACGTTATGGG GGAGTACCTA TTCTGCTAAA ATCTGTAACG
GATATTGATG AACTGAATAC TTATAAGCGA AAAACTTATG AGGAATGTGT TCAATTTATT
TCCGATGAGT GTGATGCGGT AGTGCCCCTG CTGAACGAGA GCTGGGTAGG TTTTGATGGC
GACAAGTGGC GTGGCAGGGT AACCAAAGGA GCGGCAATGG CATTGAAAGC AAGGGTATTG
CTATATGCTG CCAGTCCGCT TAATAATGCA TCCAATGATA TTACCAAATG GCAAAAGGCC
GCAAAAGCAG CGCACGATGT AATTGCCCTG AATAAGTATG GCTTGCATAC TGACTATAGA
GGATTGTTTA GGTTGGGGAA TGGGGCTGAT GGAAACCCGG AGATCATTTT CGCACAGCAG
GGTTATAACA GAAACGATTA TGAAAAATAC AATTACCCTA TTGGCTATGA CCAGGGGGGG
TTAGGGAGCA CCTCTCCATC ACAGAATCTG GTAGATGCTT ATGAAATGAA AACTACGGGC
CTTGCTATAA CTGAAAATGG GTCAGGTTAT GATCCGGCCA ATCCATATGC GAACAGAGAT
CCACGCTTAG GGCTTAGCAT ACTGGTCAGC AATACTTCCT TTAAAGGACG CCCGGTGGAA
GCCTGGGTAG GTGGTTTGGA TGGGCTTGGT AAATTTAAGG CAACTACGAC CGGTTACTAT
ATCCGCAAAT ACGTGGACGA AAACCTGAAC CTGGCCCAGG GGGCGACCAG CTTGCATACC
TGGATGATTT TCCGGTATGC AGAGGTGCTG TTAAACTATG CCGAAGCGAT GAATGAAGCT
TATGGCCCCG ACGTTACGGC CGGTTATAGC ATGTCGGCAA AAAAAGCCGT AGATATGGTC
AGGGCCCGGA CGGGTATTGC TATGCCACCT CTTCCTCCCG GTCTTTCAGT TGATGAAATG
CGTTTACGCA TCAGAAACGA ACGACGGGTT GAGCTTGCAT TTGAAGAACA CCGTTTCTTT
GATGTCAGGA GATGGAAAAT TGCTGCACAA ACAGAGAATA GACCGGTAAT GGCCATGAAG
ATCACGAAAA ATACAAATGG AAGTTTTAGT TATCTGGTGG TTAAGGCGGA AGACAGGACA
TTTAGCGAAC GTATGTATTT ATACCCTATT CCCGAAGTTG AGGTGCTTAA AAGTAACGGA
AGTCTGGTCC AAAATCCGGG CTGGTAA
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| Protein sequence | MKLKRFMLGL MAILTTFMGC KDYLDREIPT NVKDDQVFVN YDRISQAGYG AYAFLFNTIG
YNRINGAMLA SGCDEADHAD NISSIQRFNT GTWNATFNPE DVWGLFYQGI RRANLFLEES
ADFKNLIYRD TINVTNKDLY KYRVRDLEWL RAENRFLRAY YYAELIKRYG GVPILLKSVT
DIDELNTYKR KTYEECVQFI SDECDAVVPL LNESWVGFDG DKWRGRVTKG AAMALKARVL
LYAASPLNNA SNDITKWQKA AKAAHDVIAL NKYGLHTDYR GLFRLGNGAD GNPEIIFAQQ
GYNRNDYEKY NYPIGYDQGG LGSTSPSQNL VDAYEMKTTG LAITENGSGY DPANPYANRD
PRLGLSILVS NTSFKGRPVE AWVGGLDGLG KFKATTTGYY IRKYVDENLN LAQGATSLHT
WMIFRYAEVL LNYAEAMNEA YGPDVTAGYS MSAKKAVDMV RARTGIAMPP LPPGLSVDEM
RLRIRNERRV ELAFEEHRFF DVRRWKIAAQ TENRPVMAMK ITKNTNGSFS YLVVKAEDRT
FSERMYLYPI PEVEVLKSNG SLVQNPGW
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