| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3868 |
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| Symbol | |
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| ID | 8255002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4645267 |
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| End bp | 4646619 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937532 |
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| Product | sugar transporter |
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| Protein accession | YP_003094121 |
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| Protein GI | 255533749 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA GCCAGCAACC GGTGACTTTC AAAAACAGTT ATATTCTTTG CATATCATTT
ATCTCGGCAC TTGGCGGATA CCTGTTCGGT TTCGACTTTG CCGTTATATC GGGTGCACTT
CCTTTTTTAC GTGTAGAGTT TGCGCTTAAT GCCTGGTGGG AAGGTTTTCT TACCGGTTCA
CTTGCGTTGG GTTGTATTGT TGGCTGTCTG ATGGCAGGCA ATTTAAGCGA CCGTTATGGC
CGTAAACCGG GCCTGATGCT GGCGGCACTC ATTTTTGCCC TTTCTTCCCT GGGAATGGCC
TTTTCTTCCG GGCTCAGTAT TTTTGTAATG ATGCGCTTTG CGGCAGGAGT TGGGGTAGGT
ATGGCCTCAA TGTTAAGCCC TATGTATATT GCGGAAGTTT CTCCCGCCAG TATCCGCGGC
CGGAATGTGG CCATTAACCA GCTTACCATT GTTATTGGCA TATTGATCAC TAACCTGGTC
AATTATACAC TTTCAGACAA TGGCCCGGAA GCCTGGCGAT GGATGTTTGG CCTGGGGGCA
GTGCCTTCTC TCCTTTTTTT ACTGGGCGTG GTGTGGCTTC CTGAAAGTCC GAGGTGGTTA
ATTAAAGAAG GCCGTTTGGA AAAAGCGAAG GCAGTATTGA ACAAGATCGG CAGTTCAGCC
TATGCACAGA ACATCTATAA CGACATTGAG CTTTCCCTTA GAGGGGGAGA AAAACAATCT
TATAGAGCTG TATTGGCAAA GGGTGTGCGT CCGGCAGTAA TTGTGGGCAT CACGCTGGCT
GTATTCCAGC AATTGTGTGG CATCAATGTC GTATTTAATT ATACCTCAAC CATATTTGAG
TCGGTGGGTG CCAGTCTGGA CCGCCAGTTG TTTGAAACGG TTGCCATTGG CATTGTAAAT
CTTGTTTTTA CCCTTGTTGC CATGTGGCAG GTTGACAAGC TGGGCCGCAG GCCATTGATG
CTGATCGGTT CCCTGGGCCT GTCTGTAGTA TATATTATCC TGGCATTTTT ACTTCAAAGC
CATGCTGCAG CGGGTATCGT TTCTGTATTT GTATTGTTGG CAATAGCCAT GTATGCCACC
TCACTTGCAC CGGTTACCTG GGTGCTCATT TCAGAGATCT TTCCAAATAA AATCAGGGGT
GTAGCCTCTT CAATTGCGAT TGTATCCCTT TGGGGGGCCT ATTTTATCCT GGTATTTACA
TTCCCCATCC TTGCAGAAAA ACTGGGTACC TATGGCCCTT TTTACCTGTA TGCCGGAATT
TGCCTGCTTG GCTTCCTGTT TGTGAAATCC AAGGTGCGTG AAACCAAAGG AAGGACACTT
GAAGAACTGG AGCAGGATTT GGTCAGACAT TAA
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| Protein sequence | MSTSQQPVTF KNSYILCISF ISALGGYLFG FDFAVISGAL PFLRVEFALN AWWEGFLTGS
LALGCIVGCL MAGNLSDRYG RKPGLMLAAL IFALSSLGMA FSSGLSIFVM MRFAAGVGVG
MASMLSPMYI AEVSPASIRG RNVAINQLTI VIGILITNLV NYTLSDNGPE AWRWMFGLGA
VPSLLFLLGV VWLPESPRWL IKEGRLEKAK AVLNKIGSSA YAQNIYNDIE LSLRGGEKQS
YRAVLAKGVR PAVIVGITLA VFQQLCGINV VFNYTSTIFE SVGASLDRQL FETVAIGIVN
LVFTLVAMWQ VDKLGRRPLM LIGSLGLSVV YIILAFLLQS HAAAGIVSVF VLLAIAMYAT
SLAPVTWVLI SEIFPNKIRG VASSIAIVSL WGAYFILVFT FPILAEKLGT YGPFYLYAGI
CLLGFLFVKS KVRETKGRTL EELEQDLVRH
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