Gene Phep_3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3841 
Symbol 
ID8254975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4612191 
End bp4612622 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID644937505 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase Dut 
Protein accessionYP_003094094 
Protein GI255533722 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.691801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA ATATCATTAA CAATTCCGGG CACCCGCTGC CACAATATGA AACTGCCCAT 
GCTGCAGGGA TGGACTTACG TGCTTTTATA GAAACAGAAA TTACGATAAA ACCGTTGCAG
CGGGTACTGG TGCCAACAGG TTTGTACATA GAACTGCCTG TAGGCTATGA GGCCCAGATC
CGCCCGCGTA GCGGCCTGGC CTATAAACAT GGCATCAGTA TTGTGAACGC ACCAGGGACG
ATAGATGCGG ATTATCGCGG AGAGCTTAAA GTGTTGCTGG TGAATTTATC GGATACGGAT
TTTGTGGTGA ACAATGGCGA CAGGATTGCA CAAATGGTAA TTGCAAAGCA TGAGACCGCT
GTGTGGAATG TGGTTGAAGA ACTAAGTGGA ACGGAAAGGG GTGCCGGTGG TTACGGGCAT
ACCGGTAAAT AA
 
Protein sequence
MNINIINNSG HPLPQYETAH AAGMDLRAFI ETEITIKPLQ RVLVPTGLYI ELPVGYEAQI 
RPRSGLAYKH GISIVNAPGT IDADYRGELK VLLVNLSDTD FVVNNGDRIA QMVIAKHETA
VWNVVEELSG TERGAGGYGH TGK