Gene Phep_3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3839 
Symbol 
ID8254973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4610364 
End bp4611155 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content40% 
IMG OID644937503 
Producthypothetical protein 
Protein accessionYP_003094092 
Protein GI255533720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.680601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAA GTATTTGGAA TAAATGGATT TGCGCAGTAT TGATTTCGAC AGGTTTACTG 
GCCTGTAAGG CTAAAAAAGC AATAGTTGCT GTACCAAAAA CAGGCGGAAC CGCTGTGGTA
AACAACAGGA AATCTGAGAA CCTGGCCATG CTGAAAAAAA ACGATCTTTC TTTTAATACC
CTCTCTTTAA AAGGGAAGGC GAGTCTTAGC ATCAATGGGA ACAGCAACAA TGTGAACATG
AACATTAAGA TCAAAAAAGA TGAAATGATC TGGGTAAGTG TAACTGCAAT TGCAGGGATA
GAGGTAGCCC GTGTTTTAAT TACACCTGAC AGCATTAAGG TGAGGAACAA TTTTCAGGGG
GTATACCTGA AAAAGCCTTT TGATTATGTG CATGCCTATA CCAATAAGCA GGTGAGCTTT
AAATTGCTGC AATCGGTACT TTCCGGAAAT ACCATTGATG ATTTTATGGT AGCACAATCG
GAACTGGGGG AGCAGAATGG AGTTTGGGAG CTAAAGGGGC AGCAGCAGGA TCTGGCTTAC
AGGGTAGTGT TCAATACTTT ATTGAAAGTT AGCGAGAACA ATCTGAACGA TATGAAATCG
GGCAAAGCTT TAAAGGTTGT GTATGGGGAT TACCAGAAAG TAATTGACGA ACTTTTCCCT
TCCAATATGC AGATCAGTTC GTTGGCAGGG ATAAAACAGG TAGACATTCA GCTCGATTTT
TCAAAGATTG AACGCAATGT TCCACTTGAT TTTCCGTTTA GTGTTCCTAA GAAGTATGAA
GTAATAAACT GA
 
Protein sequence
MNGSIWNKWI CAVLISTGLL ACKAKKAIVA VPKTGGTAVV NNRKSENLAM LKKNDLSFNT 
LSLKGKASLS INGNSNNVNM NIKIKKDEMI WVSVTAIAGI EVARVLITPD SIKVRNNFQG
VYLKKPFDYV HAYTNKQVSF KLLQSVLSGN TIDDFMVAQS ELGEQNGVWE LKGQQQDLAY
RVVFNTLLKV SENNLNDMKS GKALKVVYGD YQKVIDELFP SNMQISSLAG IKQVDIQLDF
SKIERNVPLD FPFSVPKKYE VIN