| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3824 |
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| Symbol | |
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| ID | 8254958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4588403 |
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| End bp | 4590382 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937488 |
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| Product | dehydrogenase E1 component |
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| Protein accession | YP_003094077 |
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| Protein GI | 255533705 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.200241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.786023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG ACAGAAAAGA TAAGGACAAT GTCACGCTGT TAAATTTTTA TTTACAACTC
CTATATCCCA GGATGGTGGA GGAAAAGATG TTGATCTTAT TGCGTCAGGG CCGTATTGGA
AAATGGTTTT CTGGTATTGG ACAGGAAGCC ATAGCAGTGG GCAGTACCAT GGCGATGAAA
GCCTCGGAGT ACATCCTTCC CATGCACAGA AATTTAGGGG TCTTTACTTC AAGGAATGTA
TCCTTAACCA AACTGATGGC CCAATGGCAG GGCAAAGCTA CTGGTTTTAC AAAAGGCCGC
GACCGTTCCT TTCATTTCGG AACCCAGGAA CACAAAATCA TTGGAATGAT ATCCCATTTA
GGGCCTCAAA TGGCACTTGC CGACGGTATT GCCCTTGCAG ATGTACTGAC GGGCAAGCAA
CAAGTTACGC TGGTATTCAC AGGAGAAGGC GCGACCAGTG AGGGCGATTT TCATGAGGCC
GTTAATGTAG CCGCAGTATG GGACCTGCCA GTTATTTTTT TAATTGAAAA CAATGGCTAT
GGCCTATCAA CGCCTGTTAA CGAACAATTT AGATGTAAGA ACCTGATAGA TAAAGCCATA
GGTTATGGCA TCGAAGGATT TAAAGTGGAT GGAAATAACA TCCTTGAAGT ATATGACCTG
ATTGACAGGG TTGCCTGCAG AATGCGGGAA AACCCTAAAC CTGTACTGAT AGAATGCCTT
ACTTTTAGAA TGCGTGGTCA TGAAGAGGCC TCGGGCACAA AGTATGTTCC CCAGGAGCTT
TTAGATGAGT GGGAAAAAAA AGATCCTGTT AAAAATTTCG AACAGTATCT GCTCGATCAA
AAAATACTTA ATCCGGATTC AATTGAGGAA ATAAAAGCCA GCCTGAAAAC TGAGATTGAT
AATGAGGTTG AAAATGCTTT TAATGAAGCC GATCCGCTTG CTGATTCTGA AAGGGAATTG
AAAGCCATGT ATTTCCCTTA TGCTGGTACA AGCACAGCAC CGGATAGTAC TATTGCAAAA
GATATCCGTT ACATTGATGC CATTTCTGAT GGTCTCCGTG TAGCCATGCG AAGGCACAAC
AACCTGGTAC TAATGGGCCA GGATATTGCG GAATATGGTG GTGCCTTTAA AATAACTGAT
GGTTTTGCCG AGGAATTTGG CAAAGCGCGG GTACGGAACA CCCCTATCTG CGAATCGGCC
ATTGTAGGCG CAGCGCTTGG CCTTTCCATA AACGGGTATA AGGCCATGGT GGAAATGCAG
TTTGCCGACT TTGTGACCTG TGGTTTTAAC CAGATTGTAA ATAATCTGGC TAAAACACAT
TACCGCTGGG GAGAAAAAGC AGATGTGCTG ATCCGTATGC CTACCGGTGC TGGTACAGGT
GCTGGTCCTT TTCATTCACA AAGCAATGAA GCCTGGTTTA CTAAAACACC TGGGTTAAAG
GTGGTGTACC CGGCCTTTCC CGCAGATGCC AAAGGCCTGC TCCTTGCCGC CATAGAAGAT
CCAAACCCGG TCATGTATTT TGAACATAAA TACCTGTACC GTTCTCTGCA CGGACTTGTA
CCGGAAGGCT TTTATACCCT GGAAATAGGG AAAGCAAACG TCTTGAGACG TGGTGAACAA
TGCTGCATCA TTACTTATGG TTTAGGTGTT CATTGGGCAA TGTCCTACCT GGACCAAAAT
CCGGACCTTT CTGTTACACT GGTAGATTTG CGAAGTTTGC AGCCCTGGGA CAAAGAAACT
GTGGCCAGTG CCGTTAAAAC AACCGGACGG GTGCTTATTT TACATGAAGA CACACTGTGT
TCTGGTTTTG GTGCTGAACT TGCCGCCTGG ATTTCCGAGC ATTGCTTTAA ATACCTGGAT
GCTCCGGTAA TGCGCTGCGC CAGTAGTGAT ACAGCAATTC CCATGAATAA GGTACTGGAA
GATAGCTTTC TTGCAAAAAG TCGTTTAAAG GGTTCGATCA GACGTTTACT CGCCTATTAA
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| Protein sequence | MTFDRKDKDN VTLLNFYLQL LYPRMVEEKM LILLRQGRIG KWFSGIGQEA IAVGSTMAMK
ASEYILPMHR NLGVFTSRNV SLTKLMAQWQ GKATGFTKGR DRSFHFGTQE HKIIGMISHL
GPQMALADGI ALADVLTGKQ QVTLVFTGEG ATSEGDFHEA VNVAAVWDLP VIFLIENNGY
GLSTPVNEQF RCKNLIDKAI GYGIEGFKVD GNNILEVYDL IDRVACRMRE NPKPVLIECL
TFRMRGHEEA SGTKYVPQEL LDEWEKKDPV KNFEQYLLDQ KILNPDSIEE IKASLKTEID
NEVENAFNEA DPLADSEREL KAMYFPYAGT STAPDSTIAK DIRYIDAISD GLRVAMRRHN
NLVLMGQDIA EYGGAFKITD GFAEEFGKAR VRNTPICESA IVGAALGLSI NGYKAMVEMQ
FADFVTCGFN QIVNNLAKTH YRWGEKADVL IRMPTGAGTG AGPFHSQSNE AWFTKTPGLK
VVYPAFPADA KGLLLAAIED PNPVMYFEHK YLYRSLHGLV PEGFYTLEIG KANVLRRGEQ
CCIITYGLGV HWAMSYLDQN PDLSVTLVDL RSLQPWDKET VASAVKTTGR VLILHEDTLC
SGFGAELAAW ISEHCFKYLD APVMRCASSD TAIPMNKVLE DSFLAKSRLK GSIRRLLAY
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