| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3813 |
|---|
| Symbol | |
|---|
| ID | 8254947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4578046 |
|---|
| End bp | 4579125 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644937477 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_003094066 |
|---|
| Protein GI | 255533694 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.389069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA AAATTAAAAT TGGGATAAGC ATAGGCGATA TAAACGGCAT CGGATTAGAA
GTAATTTTGA AGGCCTTGTC GCACAACAGC ATACTTGATT ACTGTACACC AATAGTTTAC
GGGCATACAA AAGTTGCTTC TTATCATAGA AAGGCATTGG GGCTTACCGA CTTCGCTTTT
AATGTGATCA ATGAACCGGC CACAGCAAAC CCCAAAAAGC CCAACCTGAT CAACTGCTGG
GAGGAAGATG TCAAGATTGA CCTTGGTATC TCAAACGAAA CAGGCGGTAA GTATGCTTTA
ATATCTCTTC AAAAAGCTAC CGATGCATTG GTAAAAGGAG AAATTGATGC GCTTGTTACC
GCACCGATCA ATAAACACAA CATTCAATCG GATACTTTTA AATTTCCGGG ACATACAGAA
TATTTACAGG AACAGAGCAA CAGCAATGAT GTACTGATGT TCATGATCAG CGAGGACATC
CGTGTGGGTG TAGTAACGGG ACACATTCCG GTTGCGGCTA TTGCCCCCCA CATCAGCAAA
GAAAAAATTG TAAAAAAACT GATGTTGATG AACGAGAGCT TAAAGAAAGA TTTCTGGATA
GAAAAACCAA AAATTGCAGT ACTTGGCTTA AATCCGCATG CCGGAGATAA CGGCCTGTTA
GGTAAAGAGG AGGAAAACAT AATTGTACCT GCGATACAGG AGGCCTTTGA TAAAGGCATA
ATTTGTTTTG GGCCATATCC TGCAGATGGT TTTTTTGGAA ACGGCAGCTA CAAACAGTTT
GATGCAGTAT TGGCGATGTA CCATGATCAG GGACTGATCC CGTTTAAGAC CATTGCTTTT
GGCACCGGGG TTAACTTCTC TGCCGGACTA AAAATTGTAC GTACCTCACC TGACCATGGT
ACCGGTTATG ACATTGCTGG TAAAAATCTT GCAGATCCCT CTTCGTTTAT TGAAGCCGTA
TTTGCAGCTA CACATATAGT TAAGAACAGA AGAGAACAGG AAGCCTTACT TGGCAATCAA
TTAAGAAGCG GTGGAAAAAT TATTGAAACT CCCGCCGATA TGAAGGACGA CGCGAATTAA
|
|---|
| Protein sequence | MSNKIKIGIS IGDINGIGLE VILKALSHNS ILDYCTPIVY GHTKVASYHR KALGLTDFAF
NVINEPATAN PKKPNLINCW EEDVKIDLGI SNETGGKYAL ISLQKATDAL VKGEIDALVT
APINKHNIQS DTFKFPGHTE YLQEQSNSND VLMFMISEDI RVGVVTGHIP VAAIAPHISK
EKIVKKLMLM NESLKKDFWI EKPKIAVLGL NPHAGDNGLL GKEEENIIVP AIQEAFDKGI
ICFGPYPADG FFGNGSYKQF DAVLAMYHDQ GLIPFKTIAF GTGVNFSAGL KIVRTSPDHG
TGYDIAGKNL ADPSSFIEAV FAATHIVKNR REQEALLGNQ LRSGGKIIET PADMKDDAN
|
|---|
| |