Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3811 |
Symbol | |
ID | 8254945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4576185 |
End bp | 4577108 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937475 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_003094064 |
Protein GI | 255533692 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.126592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA AGATCTTAAT TGTTGATGAC CTGCACCCTA TATTTAAAGA AAGGGCTGCT GCAATGGGTT ATGATGTACA TGACCGCCCC TTGATTACCA GGGCAGAAAC ACTGGCCATC ATTGCGGATT ATGAAGGGAT TGCTGTCCGC ACCAAATTTT TAATAGATAA AGAATTAATG GAAGCAGCCC CAAACCTGAA ATTCATTGCA AGGGCAGGGG CAGGACTGGA TAATATTGAT GAGGCCTTTG CCAAATTAAA GGGGATCAAA TTACTGAATG CCCCCGAAGG CAATATGGAT GCTGTAGGAG AACATGCTAT TGGCATGTTG CTGGCGCTCA TGAACAATTT TCGGAATGCT GATACAGAAG TGCGTAAGGG TGTGTGGGAT AGAGAAGGTA ACCGCGGATA TGAACTAAAG GGTAAAACAG TTGGGATTAT CGGTTATGGA TTTATGGGCA AAAGCTTCGC TAAAAAGCTT TCCGGCTTTG ATGTCCATGT CATTGCTTAT GATAAATATA AAACGGGTTT TAGTGATGCC TATGCCAGGG AGGTCAGCAT GGAAGAAATT GTAAAGCAAA GTGATGTGCT GAGCCTGCAT ATTCCTTTAA CCCCCGAAAC AAGGCAAATG GTAAATGAAG AATACCTGTT CCATTTTCGT AAACCCCTGT TTTTTATCAA TACCGCCAGG GGCGAGGTGG TTAGCACCGA AGCCGTTTTA AAAGCGATAG CCCAGGGTAA GATACTCGGT GCGGGGCTGG ATGTACTGGA GGTAGAAAAA TTTCCGGCAT TAAGCAATCA GGAATGGTAT AATGCGCTTA AATTAGCTGA AAAGGTTGTG TTAACACCTC ATGTTGGTGG CTGGACATTC GATTCTTACC GTAAGATTTC AGAAGTTCTG GCAGAAAAGT TAAAGGACAT CTGA
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Protein sequence | MKGKILIVDD LHPIFKERAA AMGYDVHDRP LITRAETLAI IADYEGIAVR TKFLIDKELM EAAPNLKFIA RAGAGLDNID EAFAKLKGIK LLNAPEGNMD AVGEHAIGML LALMNNFRNA DTEVRKGVWD REGNRGYELK GKTVGIIGYG FMGKSFAKKL SGFDVHVIAY DKYKTGFSDA YAREVSMEEI VKQSDVLSLH IPLTPETRQM VNEEYLFHFR KPLFFINTAR GEVVSTEAVL KAIAQGKILG AGLDVLEVEK FPALSNQEWY NALKLAEKVV LTPHVGGWTF DSYRKISEVL AEKLKDI
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