Gene Phep_3783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3783 
Symbol 
ID8254917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4536497 
End bp4537816 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content44% 
IMG OID644937447 
Producthypothetical protein 
Protein accessionYP_003094036 
Protein GI255533664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTT ATTGTGTCCT CCTCACCCTT TCCTGGCTGA TTTCTACTCA ATTTGTAGTT 
GCACAGACTC GAGTTCAAAA AAAACAGTTT GCCCAAGCGG CTTTAGCTCC AATTGGACCA
AATGATTTTA AGGGCAGTGA TACGCACCGC ATACAAGCGG CTGTAAATGC TGCAAAAGGC
ACTACCAATA GCATTACCAT TCCACAAAGA AACGCAAACG GAACCACGAT CTGGAAAATA
GACCAGGCTA TATTGCTTCC TTCAGAGATG ACCGTGATTC TAGAAAACTG CGTGATCCAG
CTATCGGATA GTTGTCGCGA TAACATGTTT CGCAGTGACA ATGCAGGTAT CGGGATCACG
AATCCTGTAT GGAATAAAAA CATCTCGATC ATCGGCATTG GGGATGTTGT ATTAAAAGGT
GCAGCCAATC CCAGGGCAAC TGGAGACGGC TTCAGAAAGC TAAGCCTGAC TGCTACACCT
ACCCACAATA AGGACAGGAG CAGTTACGGT ACGGATGCCG GTAAGGAAAA CAGAAAACAG
CAATCCGACT GGCGTAACTT TATGGTATTG ATGGCTTATG TTGACGGTTT TAAATTAAAA
AATGTGCAGA TAGCATACGC CCATGCCTGG GCCGTTACCT TCGAACGCGT GCATCATGCA
GAATTATCAG ATCTCCGGTT TTACACTCCC CAGTTTAGGG ATTTCAATGA CAAAAGGATA
TACACTTATA ATAACGACGC AATCAACCTA AGGGAGGGTT GTAAATATTT TCGGATAGAT
AATATTACCG CTGTAAACGG CGACGACTGT ATTGCGCTTT CGGCACTTGA CTTAGGGCCG
GAATTTCATT CGAACGGCAA CATCAACTCT TATCAGATTA CTTCTACCAA ACACACCGGG
CCAGAAGATC ATATTGAACA CGTATATATT ACCAATATCA AAACGAATTA TACCGGAGTA
GGCATCAGGG CAAGTGACAG TGCGAGCATT CATCATGTAT ACATTAACGG GGTAACAACC
GCAGCAGATC CCAACATTCA AGCGCCATAT AATGGAAGCC CTTACACTGT GCTGCTTGGC
AACCGGGCCT ATGGAAAACC ACCGCTACCC GGACTTATCC ATAACATTTA CGTCATGAAC
ATTGTTGGAG ACGGGCTTAA CCTGATCGAT GTGAAATCGC CCATTGCAAA CTGTGTTTTT
ATGAATGGAA TATATACCGG TACAGCTGCC GCGGGACCAG TAAGCTATTC AACCGATAAA
ACTTTAATCA AAAATGTAAC TGAAGTAAAT CTTGTCAAAA TACCTTCAGA AGTCAAATAG
 
Protein sequence
MRFYCVLLTL SWLISTQFVV AQTRVQKKQF AQAALAPIGP NDFKGSDTHR IQAAVNAAKG 
TTNSITIPQR NANGTTIWKI DQAILLPSEM TVILENCVIQ LSDSCRDNMF RSDNAGIGIT
NPVWNKNISI IGIGDVVLKG AANPRATGDG FRKLSLTATP THNKDRSSYG TDAGKENRKQ
QSDWRNFMVL MAYVDGFKLK NVQIAYAHAW AVTFERVHHA ELSDLRFYTP QFRDFNDKRI
YTYNNDAINL REGCKYFRID NITAVNGDDC IALSALDLGP EFHSNGNINS YQITSTKHTG
PEDHIEHVYI TNIKTNYTGV GIRASDSASI HHVYINGVTT AADPNIQAPY NGSPYTVLLG
NRAYGKPPLP GLIHNIYVMN IVGDGLNLID VKSPIANCVF MNGIYTGTAA AGPVSYSTDK
TLIKNVTEVN LVKIPSEVK