Gene Phep_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3770 
Symbol 
ID8254902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4515874 
End bp4517280 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content43% 
IMG OID644937432 
ProductSialate O-acetylesterase 
Protein accessionYP_003094023 
Protein GI255533651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0438855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTTA TTAGCCTGGG ATTTTTTTTT AATCCGGTTT ATGCCCAACT CAGGCTTCCT 
TCTTTTTTCT CTGATCACAT GATCCTGCAG CGGGATACGG TGACTTCGAT ATGGGGCTGG
GCACGGGCTG GCGCAGAAGT AGTGGTCATT CCGGACTGGA CAACAGATTC TTTAAAAGTA
ACTACAGATG GCAATGCAAA ATGGCAGTTG AAGTTGCCGG TGGGAAAAGC CGGAAAACCA
CACCGCATTA AAATCATCTC AAAAAAAGAT ACGGTTATCC TTAATGATGT AATTTTTGGA
GAGTTGTGGT TATGTTCAGG GCAATCTAAT ATGCAATGGA ATGCATTGAA TGATTTAAAA
GAAATGAAAG ATGTGCTGCC GGGTATCCGT AATTCCAATA TACGGTTTTT AAATGTGAGT
AATATCGCTT CAGCTTATCC GCAGGACGAC CTGGTTAACT CATGGCAGCT GTGTGATTCT
ACAAGTGCCT CAACATTCAG CGCCATCGGA TATTTTTTCG CTGAAGAAAT CTCCAAACGC
TTAAATGTAC CGGTGGGGAT CATCAATGCC AGCTGGGGAG GTACCTGTGC GGAAGTATGG
ACACCAGGGG AACTAGTCAT GAACGATGAA CTGTTATTGA AGGCTTCGCA GCTGAAGAAG
GTTGCGCCCA GAAAACCAAA CCTGCCCGGC TATGCCTGGA ACAGTATGGT CCACCCTTTG
GTTGGATACA CTATTGCGGG CGTACTTTGG TATCAGGGAG AGGATAATGT GGCTTCTTAT
GACTCGTATG AACGCTTATT CGCGATGATG ATCAAAAGTT GGCGCAAATC CTGGAATGAT
GAATTTCCGT TTTACTTTGC GCAGATTGCC CCCTATACCT ATAAAAATAA AGAATTGCCG
AAAGCAGCTT ATTTGCGCGA GCAACAGACC TTTACCGCAT TGCATAACGA GCGGGTGAAA
ATGGTGCTGA CATCAGATCT AGTTTCGGAC ATCAAAAACA TCCACCCTAC AAGAAAAAGA
GAGGTAGCGA AACGCTTTGC TAATGTCGCC CTGCACGAGA ATTACAAAAT TAACCTTCAG
AATCCTTATT CAGCATTGTA TAAGGCTGCA CAGGTAAAAG GGGATAAAAT AGAAGTGTCT
TTTTTTAATA TGGAGGGAAA TACATTTGAT AACAAATCCG GAGAAATTGA AGGATTGTTT
ATAGCCGGGG AAGACCAGGT ATTTCACCAG GCAAAAGCAA AAAGTATGAG GGCCAGACTC
CTGGTGTATA GCGATCAGGT TAAAAAACCT GTAGCTGTAC GGTATGCTTT TTCTGAAACT
GATGAAACCA GACTGCATAC CACTAACGGA CTTCCAGTAT CCCTTTTCAG GACGGACAAC
TGGTTGCAGT TCACTAAAAA AGAATAA
 
Protein sequence
MLFISLGFFF NPVYAQLRLP SFFSDHMILQ RDTVTSIWGW ARAGAEVVVI PDWTTDSLKV 
TTDGNAKWQL KLPVGKAGKP HRIKIISKKD TVILNDVIFG ELWLCSGQSN MQWNALNDLK
EMKDVLPGIR NSNIRFLNVS NIASAYPQDD LVNSWQLCDS TSASTFSAIG YFFAEEISKR
LNVPVGIINA SWGGTCAEVW TPGELVMNDE LLLKASQLKK VAPRKPNLPG YAWNSMVHPL
VGYTIAGVLW YQGEDNVASY DSYERLFAMM IKSWRKSWND EFPFYFAQIA PYTYKNKELP
KAAYLREQQT FTALHNERVK MVLTSDLVSD IKNIHPTRKR EVAKRFANVA LHENYKINLQ
NPYSALYKAA QVKGDKIEVS FFNMEGNTFD NKSGEIEGLF IAGEDQVFHQ AKAKSMRARL
LVYSDQVKKP VAVRYAFSET DETRLHTTNG LPVSLFRTDN WLQFTKKE