Gene Phep_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3758 
Symbol 
ID8254890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4503176 
End bp4503775 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID644937420 
Productcyclic nucleotide-binding 
Protein accessionYP_003094011 
Protein GI255533639 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC AGGATGGATG TTATGATAAA CTCATTCAAT TTACAAAACA AAGGGGATTT 
GCTTTTAGCG ATAAGGAATG TAAGCTTGTA CACGCGCTTA CAAAGCACAA AACAGTAAGT
GCCCATAGTA TCCTCATGGA ACAGGGCAAA CCTGTTACAA AATTCTACTT CCTAAATTCG
GGTATTGTCC GTTTGTTCAG GGTGCACAAG GGTGTAGATT ATACGCTTGG CCTGGTTTCT
ACCAATGATT TTGTATCAAC CCTCTTATAT CTCGCCAATG GGCTGCCCTC TTCCTGCGGC
CTGGAGACCC TAACAGATGC AACATTGCTG GAGTGGGGCA AAGCAGAAGT TGAAGCGATG
AAACTGCAAC TAAGCGTGGC ACAAGATCTG GAAATGGCCA TTATGGACCG GCTGCTCAAC
TGGCTGCAAG ACCATCAGAT TGATGCCGTA TGCCTTACTG CTGAAGAGCG GTACCAAAAA
CTGATGGAGC AGCAACCAGA AGTGATCAGA ACAATCCCTT TAAAGTATAT CGCCTCCTAT
CTTGGCATTC ACCAGGATAG CCTGAGCCGG ATCCGTAAAA TTGTTAGCAG AAAAACATAA
 
Protein sequence
MKNQDGCYDK LIQFTKQRGF AFSDKECKLV HALTKHKTVS AHSILMEQGK PVTKFYFLNS 
GIVRLFRVHK GVDYTLGLVS TNDFVSTLLY LANGLPSSCG LETLTDATLL EWGKAEVEAM
KLQLSVAQDL EMAIMDRLLN WLQDHQIDAV CLTAEERYQK LMEQQPEVIR TIPLKYIASY
LGIHQDSLSR IRKIVSRKT