Gene Phep_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3712 
Symbol 
ID8254844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4427708 
End bp4429363 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content45% 
IMG OID644937374 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003093965 
Protein GI255533593 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAG TATATTGTGC CATCCTTACT TGCCTGCTCA GCCTTCAGGT AGCAGCCCAG 
CTGATGGACA AAAGACGCCC CTATACAGCT GCAGATACAT TAAGAGGAAT GCTCAGCCCC
CTGCGTACCA GCTACGACAT TAATTATTAC CACCTGGACA TCAGCCTGGA TATTGCCAAT
CAAGCGATTA AAGGAAGTAA CGAATTCCAT TTTACCGCAA CACAGCGCCT CAGTAAACTG
CAGTTCGATC TTTTTGAAAA TATGGATATA GAAAAGATCA TTTTTAAAGC GCAGCAAATT
CCATTTACAA GAAAATTTAA TGCGGTATTT GTTAGCTTTC CCCAACCTAT TGAAAAAGGC
AGCAAAGAGA AATTCACGGT ATTTTATTCA GGAAAGCCGG TCATTGCAAA GAACCCGCCC
TGGGAGGGGG GCTTCATTTT CAGTAAAGAC AAATCCGGAA AACCCTGGGT ATCTGTAGCC
TGCCAGGGCC TGGGCGCCAG CAGCTGGTGG CCCAATAAAG ACCATCAAAG CGATGAGGCC
GATAGCATGC TCATCAGTGT TACGGTACCT AAAGACCTGC AGGAAATCTC TAACGGCAGG
TTGCGCAGCA AAGTAGAAAA ACCAAATGGT CAGCTCCAGT ACAACTGGTT TGTAAACAAT
CCCATCAACA ACTACAATGT AACGCTATAC GTAGGCCGGT ATGCACACCG GGCCGACCAA
TATGCCGGAG AAAAAGGGGA ACTGAGTCTG GATTACTGGG CCCTGAAGGA AGACAGCGCA
ATAGCAGTCC CCCATTGGAA TGCAGATGTT AAACCCATGC TAAAATCCTT TGAACATTGG
TTCGGCCCCT ATCCTTTTTA TCAAGATGGC TATAAACTGG TTCAGGCGCC TTATCTCGGA
ATGGAACATC AGAGTGCAAT TGCTTATGGA AATGGTTTTA AAAAAGGATA CCTGGGTAGC
GATCTTTCCA ACACCGGCTG GGGCCTCAAA TTTGATTTCA TCACCATTCA CGAAAGCGGA
CATGAATGGT TTGGAAATAA CATCACTACA AAAGACATTG CCGACATGTG GGTACATGAA
GCCTTCGCCA ATTATGCCGA AGCCTTGTTC CTGGAATCAA ACTATGGAAA GAAAGCCGGC
GCTGAATACA TTACCGGAAT AAGGAAAAAT ATCCGGAACG ACAGCCCGAT AATCGGCACA
TACAACCTGA ACCGTGAAGG ATCGGGTGAT ATGTATTATA AAGGGGCTAA TCTCGTACAC
CTCATCCGGC AGCTGATCAA TGATGACGAA AAATTCAGAA GCATCCTCAG GGGATTAAAC
AAAACCTTTT ACCATAAAAC TGTAACCACA CAGCAGGTTG AGGAATACAT CATCAGACAG
AGTGGCTTAA ACCTGCAAAA AACCTTCGAT CAATACCTCC GGCATACCGG CATCCCGACA
TTGGAATACC AGGTCTACAA TGGTTTGCTG AAGTACAGAT GGGCAGCCGA TGTGAAAAAC
TTTGATATGC CTGTAAAAGT AAGCCTCAAG CCTGGCAATT TCAGTTTTAT CTATCCTTCA
GCCAACTGGA AAACGATTGC GGCAGATAAA AGTATAAGTA ACAGATCCTT TAAAGCAGAG
CCCAATTTCT ACATCCAGCT TAAAGCGGTC AATTAA
 
Protein sequence
MKPVYCAILT CLLSLQVAAQ LMDKRRPYTA ADTLRGMLSP LRTSYDINYY HLDISLDIAN 
QAIKGSNEFH FTATQRLSKL QFDLFENMDI EKIIFKAQQI PFTRKFNAVF VSFPQPIEKG
SKEKFTVFYS GKPVIAKNPP WEGGFIFSKD KSGKPWVSVA CQGLGASSWW PNKDHQSDEA
DSMLISVTVP KDLQEISNGR LRSKVEKPNG QLQYNWFVNN PINNYNVTLY VGRYAHRADQ
YAGEKGELSL DYWALKEDSA IAVPHWNADV KPMLKSFEHW FGPYPFYQDG YKLVQAPYLG
MEHQSAIAYG NGFKKGYLGS DLSNTGWGLK FDFITIHESG HEWFGNNITT KDIADMWVHE
AFANYAEALF LESNYGKKAG AEYITGIRKN IRNDSPIIGT YNLNREGSGD MYYKGANLVH
LIRQLINDDE KFRSILRGLN KTFYHKTVTT QQVEEYIIRQ SGLNLQKTFD QYLRHTGIPT
LEYQVYNGLL KYRWAADVKN FDMPVKVSLK PGNFSFIYPS ANWKTIAADK SISNRSFKAE
PNFYIQLKAV N