Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3676 |
Symbol | |
ID | 8254807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4387908 |
End bp | 4389482 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644937337 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_003093929 |
Protein GI | 255533557 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATAC GATCTCTATT TGTTTTTATA GCCCTTCTGA GTATTTGTAG CCTGACCTAT GCCCGGCAGG ATATCAATGC TTTTAAAGGT TATCCTGTCA TTGCACATGC AGATACCTTA TTCCATATAA AAAATAAGCT TGGCTCTTTA TCCGCCCAGG AGAGGGCCGA GAGAACCTCT GCAAAAGTGG AAGCCCTGGC AGAAGACCTG CTTTTTGTAG CTGATTCTTT AGTCACAGAA GATGATTCAA CCCTTGTGTC GATTAGCTAT AAAGGTAATG TGCTCCTGAG TTTATCGAAA GCTGATGCAG ATTCCGTAAA AATGGATAGA CAGGTAATGG TTAAGGCTTA CCAGGAAATT ATACTCAATA ATATCCATAA GTATAAGAAG GATACAGATC TGACAGAATT GTTAAAGCGT GGGGCATTAG GTATCCTGAT CATCTCTATT CTGGGCATAT GTATATTTTT CCTGAATAAA TATTCAAACC GTTTCAATGC CTGGCTCCGG GTAAAGCTGC ATCAAAGGAT TGCAGGCCTT AAAATTAAAA ATTATGAATT GATTAGCGGT AAGGACGAGC TGCTGCTGAT CCGAAAGGTA CTTAACCTGG TTAAGATACT TGTGATATTT ATTCTTGTTT ACCTTACGCT GCCTATCGTA TTTCGCCTTT TTCCTTGGAC AAAACCCTGG AGTGATAGTC TGATTGGTTT TGTGCTTAAC CCCCTGAAAA ATATATTCAG CGGAATTATT GCCTTTATCC CCGACCTGAT CACAATAGCC GTTATTGTGT TTGTATTTCA CTACATTAAA AAAGCAATTA AATTTCTGGC AAATGAGATT GAAGCGGAGA AACTTAAGAT CAATGGTTTT TATGCCGATT GGGCAAAGCC AACCTTTAAC ATTGTCAGGC TTGTATTAAA TGCGTTTATG CTGGTGGTGA TATGGCCATT TATCCCGGGC TCAGATTCGG GTATATTTAA AGGTGTTTCT GTATTTTTAG GATTGCTCAT CTCTTTTGGT TCTTCGTCTG CCATCAGCAA TGGTGTGGCC GGTATGGTCA TTACCTATAT GCGGCCTTTT AAATTAGGTG ATATTGTGAA GATTGGTGAT ACAACGGGTA CTGTACTGGA AAAATCACTG TTGGTCACGC GTATCTTAAC TTTTAAAAAT GAGGTCATTA CCATTCCCAA TAGTGCTATA TTAAATGGGA ACACAGTAAA TTACAGCAGT ATGGCCAGTC AGAATGATTT GATTATCCAC ACATCTGTTA CCCTTGGCTA CGATCTTCCC TGGGCACAAA TTCATGAACT CTTAATTGCT GCGGCTTTGG CTTCTGAAGG GGTAATCAAG GAAAAAGCGC CGTTTGTATT ACAAACCAGC CTTGAAGACT GGTATGTATC CTATGAACTG AATGTTTATA TCAATAATCC ACAGAAAATG CCCCGTATCT ATTCGGAGCT CCATAAGCAA ATTCATATCG CTTTTGATGC TGCAGGTGTA GAAATCATGT CGCCGCATTA CCAGGCCATT AGGGATGGGA ACGCAAGTAC TGTTTCCCCC ATTAAGGTGT CTTAA
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Protein sequence | MSIRSLFVFI ALLSICSLTY ARQDINAFKG YPVIAHADTL FHIKNKLGSL SAQERAERTS AKVEALAEDL LFVADSLVTE DDSTLVSISY KGNVLLSLSK ADADSVKMDR QVMVKAYQEI ILNNIHKYKK DTDLTELLKR GALGILIISI LGICIFFLNK YSNRFNAWLR VKLHQRIAGL KIKNYELISG KDELLLIRKV LNLVKILVIF ILVYLTLPIV FRLFPWTKPW SDSLIGFVLN PLKNIFSGII AFIPDLITIA VIVFVFHYIK KAIKFLANEI EAEKLKINGF YADWAKPTFN IVRLVLNAFM LVVIWPFIPG SDSGIFKGVS VFLGLLISFG SSSAISNGVA GMVITYMRPF KLGDIVKIGD TTGTVLEKSL LVTRILTFKN EVITIPNSAI LNGNTVNYSS MASQNDLIIH TSVTLGYDLP WAQIHELLIA AALASEGVIK EKAPFVLQTS LEDWYVSYEL NVYINNPQKM PRIYSELHKQ IHIAFDAAGV EIMSPHYQAI RDGNASTVSP IKVS
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