Gene Phep_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3621 
Symbol 
ID8254752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4328628 
End bp4329137 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content42% 
IMG OID644937282 
Productbifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 
Protein accessionYP_003093874 
Protein GI255533502 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAT CTCAATTGCT TATTCTTGAT AAAAAGCAGA TACAACAGAA AATAAACAGG 
ATAGCTTATC AGATACTGGA AGACAACCTG AATGAAAAGG AGATTGTACT GGCAGGTATC
TGGGACAGGG GGTATAAACT GGCCTTACGG TTGAAGAAGG TATTGTCCAA AATTTCTGAC
CTGAAGATCA CGATGCTGAA AATTGAGCTG GACAGGCAAA ACAGTAAGCT GGTTGCCAAT
ACAGACCTCG ATGAAGTACA CTGGAGAAAT AAGGTGATCA TCCTGGTTGA TGACGTACTG
AACAGCGGAA AAACACTGGC CTATGGCTTA GGTGTTTTCT TAAATACCCC CCATAAAAAG
ATCAGAACGG TAGTACTGGT AGACAGGAGC CATAAGATAT TCCCGATTGC TACAGATTTT
GTTGGACTGG AGCTGGCAAC TGTATTAAAA GAACACGTAG ATGTGGTAAT GGATGTGGAT
GGAGAAGAGG ACAGGGTTTA TTTAAGCTAG
 
Protein sequence
MAGSQLLILD KKQIQQKINR IAYQILEDNL NEKEIVLAGI WDRGYKLALR LKKVLSKISD 
LKITMLKIEL DRQNSKLVAN TDLDEVHWRN KVIILVDDVL NSGKTLAYGL GVFLNTPHKK
IRTVVLVDRS HKIFPIATDF VGLELATVLK EHVDVVMDVD GEEDRVYLS