| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3574 |
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| Symbol | |
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| ID | 8254696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4252150 |
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| End bp | 4253289 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937226 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_003093827 |
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| Protein GI | 255533455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.140517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.577765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAA AAAAATTCAA TTCCCAAAAG AATATTAACA TGTGGAAGTA TCAACCTTTT
TTACCGCTGT TAAGTAAGGC CAATCGTATC AGCATGGGCG AGGGGCAAAC TCCTCTTGTT
AAGTCCAGAT CCATAGGCCC GGCGCTGGGC ATACCAGACT TGTATTTTAA GTTGGAAAAC
CTTAATCCAA CAGGTTCCTA CAAGGACCGT TTTGCTTCCG CTTTTGTAAG TATGATGAAA
AGTCGGAAAC AGGATCTTTG TATAGCAACA TCCAGTGGCA ATACGGGTGC GGCGTTAGCG
GCTTATTGTG CCGCGGCCAA TATCAGATGC ATAATAACCG TGGTTGACGG GGCTCCTGAT
GCGAAGATTA AGCAGATGCA GGTGTATGGA GCGTCTATGT TCATGGTAAA AGATTTTGGC
AAGGATCCCG AACTAAGTGC TGAAGTTTTT TCTTTACTGA ACAGCTTCGC ACTTTCTTTA
GATCTGCCCT TACCCGTAAG TGCATATTGC TATTGTCCGG AAGGAATGCA GGGGGTTCAA
ACCATAGCAT ATGAAATATT TGAACAAACC GCCAATGCTG TTCGGCATAT TTTCTGTCCG
GCAGGGGGAG GTGGGCTGAC TTTGTCTTTG GCCAAAGGCG TAATGGAATA TGGACATAGA
TATCAGCTTT CTGGTTTGCC CAGAGTGCAT TGTGTCCAGC CCGAAGGTAA CGATACGATG
GCTGGTCCGC TGAGAAATAA AGAGAATGTT GCCGTTCAAA GAGCACGTTC TACCACAGCC
GTCAGTGGCT TGCAGGTGCC AAATGTGTTA GACGGCAATG AGGTAATTAC AGCTTGTCGT
TCACTTGGCG GGACAGGATA TGCTGTAACA GACACCGAGG TGTTTAACTG GCATAAAAAA
ATGGCCCAGC AGGAGGGTAT ATTTTGTGAG CCGGCAGGTG CTGTAGCACT TGCGGGGCTA
GCACTTGCAG TTGAAAAAGG AGAAGTAGCG GATGGAGAAC AAGTCGTTTG TCTGGTTACG
GGCAGCGGTT TTAAAGATAT GTTAACGGTA GAAAAACAAT TTAGTCTACC TGCTTTGGAA
GCAATTGATA AAGCAGCTTT TGCAGTTTGG ATTGAAAAGA TGAAAAAAGG AAAAATTTAA
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| Protein sequence | MPLKKFNSQK NINMWKYQPF LPLLSKANRI SMGEGQTPLV KSRSIGPALG IPDLYFKLEN
LNPTGSYKDR FASAFVSMMK SRKQDLCIAT SSGNTGAALA AYCAAANIRC IITVVDGAPD
AKIKQMQVYG ASMFMVKDFG KDPELSAEVF SLLNSFALSL DLPLPVSAYC YCPEGMQGVQ
TIAYEIFEQT ANAVRHIFCP AGGGGLTLSL AKGVMEYGHR YQLSGLPRVH CVQPEGNDTM
AGPLRNKENV AVQRARSTTA VSGLQVPNVL DGNEVITACR SLGGTGYAVT DTEVFNWHKK
MAQQEGIFCE PAGAVALAGL ALAVEKGEVA DGEQVVCLVT GSGFKDMLTV EKQFSLPALE
AIDKAAFAVW IEKMKKGKI
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