| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3571 |
|---|
| Symbol | |
|---|
| ID | 8254693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4249364 |
|---|
| End bp | 4250830 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644937223 |
|---|
| Product | Microcystin LR degradation protein MlrC |
|---|
| Protein accession | YP_003093824 |
|---|
| Protein GI | 255533452 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5476] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.105473 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTAA AAGTAGCCGT GATGGGGATT ACCCACGAAT CCAATACGTT TGTAAAAGAA
CCTACAACGC TTCGTCAGTT TAGAGAAGGA CACTGGATGA AGGGCGAAGC TTTGCTGAAT
GAATACCGTG GTGCGTTTCA TGAACTGGGT GGCATGATCG AAGTGCTGGA ACAGGAAGGT
ATTGAGATTG TTCCGGTGAT GTATGCGGAA GCAACACCAG GGGGTATAGT TTCGACGGTT
ACTTACGAGA TTTTGTTGCA GGAGTTGTTT ACAGCATTGG ATAGTGCGCT TCCGGTGGAT
GGATGCCTGG TGGTTCCGCA TGGAGCCGGG GTATCCGAAT CATTTCGGGA TATGGATGGG
CATTGGTTAA GCCTTGTCCG GGAAAAGTTG GGCGATGGCA TTCCCATTAT TGGAACGCTT
GATCCACATG GTAATGTGAG TGATCAGATG ATTGCATCAA CCAATGCATT GGTTGCATAT
AAGACCAATC CGCACATCGA CCAGCGGGAA ACTGGGCGTT TGGCCGCAAA ATTATTGGTA
AGTACGCTGA AGAAAAAAAT AAGACCCCTT CAGCACTTAA TTCAGCTACC GATGGCCATA
AGTATAGAGC AGCAGTTTAC GGGCAAAGCG CCATGTAAAA GTTTATATGC TTTGGCTGAT
GTGCTTAGCC GGCAGCAAGG TATTTTGTCG GTCAGTATCA TGTTGGGCTT TCCTTATGCA
GATGTGGAAG AAATGGGTTC TTCTATCATT GTGGTTACTG ATGACGACGA ACAGCTGGCC
ATAGGCACCG GTAAAACGCT CGAAGCTTAT ATGATGGTAC ATAAACAAGA ATTTTTTGGG
CTTAAACAAG ATATAGAGGA TTTATTGCCG AGGATTGAAA AGAGTGAAAA ACCTGTTTTA
CTACTCGATA TGGGAGATAA TGTGGGAGGA GGAGCCCCAG GAAACAGCGC CTATTTGCTG
AAAGCGTTGG AAGCTAGGGG TAAGATCAGA TCATTTATAT GTCTTTGTGA TCCTACAGCA
GTGCAGCTTG CAACCCGGCA TGCTGTGGGA GATACTTTTG AGATGGTTAC AGGAGATCAT
GAGGATTTAA CAATGAACTA TACCAGCCGG GTAAAATTAC TTTATACTGG CGATGGAAAG
TTTAAGGAAA CTGTGCCCCG GCATGGGGGG CAGGTTAATT TTGATATGGG TAAAATTGCT
CTCGTAGTTA CATCCGCAGG AAATACAATA ATGCTGACTT CCCTGCGTGT TCCTCCTTTT
AGTTTGAAGC AATTGACCAG TTTTAACATA ATGCCTGAGG AGTTTGATGT GCTTGTTGCT
AAAGGGGTAA ATGCGCCAAT TGCCGCTTAT GCTACAGTTT GCAAGACTTT GCTACAGGTT
AATACACCGG GGGTTACCTG TGCAGATATG ACCCGTTTTA ATTATATGAA CAGAAGGAGG
CCTATATTTC CTTTTGAAGA GATTTGA
|
|---|
| Protein sequence | MRLKVAVMGI THESNTFVKE PTTLRQFREG HWMKGEALLN EYRGAFHELG GMIEVLEQEG
IEIVPVMYAE ATPGGIVSTV TYEILLQELF TALDSALPVD GCLVVPHGAG VSESFRDMDG
HWLSLVREKL GDGIPIIGTL DPHGNVSDQM IASTNALVAY KTNPHIDQRE TGRLAAKLLV
STLKKKIRPL QHLIQLPMAI SIEQQFTGKA PCKSLYALAD VLSRQQGILS VSIMLGFPYA
DVEEMGSSII VVTDDDEQLA IGTGKTLEAY MMVHKQEFFG LKQDIEDLLP RIEKSEKPVL
LLDMGDNVGG GAPGNSAYLL KALEARGKIR SFICLCDPTA VQLATRHAVG DTFEMVTGDH
EDLTMNYTSR VKLLYTGDGK FKETVPRHGG QVNFDMGKIA LVVTSAGNTI MLTSLRVPPF
SLKQLTSFNI MPEEFDVLVA KGVNAPIAAY ATVCKTLLQV NTPGVTCADM TRFNYMNRRR
PIFPFEEI
|
|---|
| |