Gene Phep_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3564 
Symbol 
ID8254686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4242162 
End bp4243040 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content40% 
IMG OID644937216 
Productaldo/keto reductase 
Protein accessionYP_003093817 
Protein GI255533445 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.138533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGGG ATAGAAGAGT TGATATTGGA TTAGGCTGTG TAACTTTTGG GCGAGAAATC 
GATCGGCTGA GTGCTTTTAG TATGATGGAT TATGCGCTGG GTAGAGGCAT TAAACTTTTT
GATACCGCTG CAGCTTATCA TCATGGGGCA TCTGAATCTA TTATAGGCAG CTGGCTGGCT
TCGCGGCAGC CAGACCAAAG CCAGGTGCGG GTGGCTACAA AAGTTTCACC ACCTTACTCT
GCTCAAAGTA TTCTCAAGTC AATAGACGAA AGCCTTAATC GTTTAGAAAA GGATACCCTG
GACATATTTT ACCTCCACTC CTGGGATGGC TCTGTTAAAA ATTTGGAGGT GTTAAGGACG
CTTGATCAAT GTGTAAAACA AGGGAAAGCA AATGCGCTTG GTGCCAGTAA TTTTACTGCA
GACCAGCTGG AAGAAGTGAT TCAATTGCAG CAATTAAATG GCCTGATGTC ATTTAAATAT
ATTCAGAATA ATCATAATCT TGCTGTTAGC GATTTAACTA AAAAGTTAAT GGATGTTTGT
AATGTAAATC AAATAGATAT TGTTACATAC AGTCCACTTG GTGCTGGTTT TCTTACTGGA
AAATATACAA ACAGCATGCC GGATGACTCT CGTTTCAGGG TAGTCCCCGG ACATCAGAAA
ATATATTTTA CTGATCAGGC ATTAAAAAAA TGTGAATGCC TTAGAAAAGT TTCTCTTCTT
ACTGGTTATA GTATGGAGCA TATCGCTATG TCATGGGCTT TACATCAATC AGGAGTTAAA
TATGCTCTGG TAGGAGGACG ATCGTGGGAA CAAGTTGAAA AGGCTTTTAT TGCACAAGGG
TTTTATGACA AAGATATTTT TCAGGCATTA GACACTTGA
 
Protein sequence
MIGDRRVDIG LGCVTFGREI DRLSAFSMMD YALGRGIKLF DTAAAYHHGA SESIIGSWLA 
SRQPDQSQVR VATKVSPPYS AQSILKSIDE SLNRLEKDTL DIFYLHSWDG SVKNLEVLRT
LDQCVKQGKA NALGASNFTA DQLEEVIQLQ QLNGLMSFKY IQNNHNLAVS DLTKKLMDVC
NVNQIDIVTY SPLGAGFLTG KYTNSMPDDS RFRVVPGHQK IYFTDQALKK CECLRKVSLL
TGYSMEHIAM SWALHQSGVK YALVGGRSWE QVEKAFIAQG FYDKDIFQAL DT