Gene Phep_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3552 
Symbol 
ID8254673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4226153 
End bp4226773 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content42% 
IMG OID644937203 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003093805 
Protein GI255533433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTT TAACACTCTT TCTGGGAATT GTCTTAAATA TGGTCGGTTA TATTCCCCCG 
GGAAACATTA ACCTTACAGT GGTTCAGATT ACCATTACCA GGGGCATTCG TCAGGCATTG
TATTTTATCT TTGCCTTCTC TACTGTAGAA ATCCTTTTCA CCTTTGGTGT TATGCGTTTT
GTACAATGGC TGTCGAGCGA AATTAACCTG GAAAACACCA TTGATGTAGT TATGGTATTC
ATGTTTGGGA TATTGGGGGT ATTAACCTGG AAGTCCAGAA AAGAAATGCC CAAGGCCGAT
TATTCTAAAA AGGACAGCAT CAGGTATGGC ATGTTACTGG GGGTTATTAA CCCTATGCAA
ATCCCTTACT GGCTGTTTGT AGGCACTTAC CTGATCTCGC ATGAATGGAT CGATATCGGT
TACCTTTCCC TTTCTGTTTT TAGTATTGGC TCGGGCGTTG GCGCCGCACT TGCCCTATAC
GGTTTTGCGC GTTTTGCCCA GTATATACAG GAAAAGTTTG CCTTAAGCAG CTATATTGTC
AACAAAAGTA TTGCCCTACT TTTCTTTGCG CTTTCTGCCT ATCACATAGG AAAGATCACG
TATATCCACT GGATCAAATA A
 
Protein sequence
MLFLTLFLGI VLNMVGYIPP GNINLTVVQI TITRGIRQAL YFIFAFSTVE ILFTFGVMRF 
VQWLSSEINL ENTIDVVMVF MFGILGVLTW KSRKEMPKAD YSKKDSIRYG MLLGVINPMQ
IPYWLFVGTY LISHEWIDIG YLSLSVFSIG SGVGAALALY GFARFAQYIQ EKFALSSYIV
NKSIALLFFA LSAYHIGKIT YIHWIK