| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3546 |
|---|
| Symbol | |
|---|
| ID | 8254667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4220141 |
|---|
| End bp | 4220935 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644937197 |
|---|
| Product | undecaprenol kinase |
|---|
| Protein accession | YP_003093799 |
|---|
| Protein GI | 255533427 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.817891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATT TGCAGGCCTT TATTCTGGCC GTAATAGAAG GGTTAACAGA GTTTTTACCT
GTTTCATCAA CCGGACACAT GGTGATTGCC AGTTCCTTTA TGGGGATTGG AAAAAATGAT
TTTGTAAAGC TTTTTGAAGT AGCCATACAG CTAGGGGCCA TTTTAGCAGT GGTAGTACTG
TATTGGAAAA AATTCTTTGA TTTTAGCAAG TGGCAGTTTT ATGTAAAGCT GATCATTGCT
GTAATACCAG CCCTGTTTTT TGGCTATCTG CTTAATGATT TTATAGACGA AACTTTAGGT
AATCCCGTAT TTATAGCAGT AGTATTACTG CTCGGTGGAA TTGTTTTGTT GTTTATAGAC
CGGTTCTTTA ACAACCAGAC CATCGATAAA GAAACAGATA TCAGCAATGT AAATGCCTTT
AAAATTGGGT GTTTCCAGGT ACTGGCAGTT GTTTTTCCAG GCTTAAGCAG AAGTGCAGCC
ACCATTATTG GGGGTATGCA GCAAAAGCTG ACCAGACATG CGGCAGCCGA ATTTTCATTT
TTTCTTGCCG TACCTACCAT GTGCGCTGCA ACAGGCTATA AACTTTTGAA GGGTTATCAC
CTTTTAAATA CGGAAAATAT AAAACTGCTG CTTTTTGGCA ACCTTATTGC CTTTATTGTA
GCCATAATTG CCATTAAATC TTTTATAGGC TTTTTATCTA AACACGGGTT CCGTATTTTT
GGCTGGTACA GAATAATCAT TGGTGTGGTA TTAATTGCAC TGTATTATTC GGGGATTGAA
ATAAACGTAA TATGA
|
|---|
| Protein sequence | MDYLQAFILA VIEGLTEFLP VSSTGHMVIA SSFMGIGKND FVKLFEVAIQ LGAILAVVVL
YWKKFFDFSK WQFYVKLIIA VIPALFFGYL LNDFIDETLG NPVFIAVVLL LGGIVLLFID
RFFNNQTIDK ETDISNVNAF KIGCFQVLAV VFPGLSRSAA TIIGGMQQKL TRHAAAEFSF
FLAVPTMCAA TGYKLLKGYH LLNTENIKLL LFGNLIAFIV AIIAIKSFIG FLSKHGFRIF
GWYRIIIGVV LIALYYSGIE INVI
|
|---|
| |