Gene Phep_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3543 
Symbol 
ID8254664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4217869 
End bp4218765 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content42% 
IMG OID644937194 
Producthypothetical protein 
Protein accessionYP_003093796 
Protein GI255533424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.165019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TAATCAAAAC CAAACTTGTT ATAGTACTGG TATTAACCAT GTGTTTACAA 
CTGAATGCAC AGCAGGCCGG TAAAACTTTA AAAGTATTGC TGATTGGCAA TAGTTTTTCA
CAGAATGCCT CGCGTTATTT GCCTCAAATG GCCGAAGAAG CGCATGTAAA ATTGGTTTTA
GGCAGGGCAG AAATGGGCGG TTGCTCTTTA AAACGCCACT GGGATTCGGT TTTGGTAAAT
GACATCGATA CCAACAGGGG TAAGGCTTAT AAAGGTCAAT CACTAAGACA GCTGTTGCAA
TCACAAAAGT GGGATATCGT GACCATGCAG CAATATTCTT TATTGTCTGG TGATGAAGGC
ACTTACCAGC CCTATGCAAC GAAAATTTAT GACCTGGTTA AAAAGTATCA GCCAGATGCG
AAGGTATTTG TTCATCAAAC CTGGGCCTAC CGTGCAGATG CAGTAAACTG GGGAATGATC
GCTTCAGAAA AACGTGCAGA AAACAATAGA GAAATGTGGG AAAAATCGAG GGCAGCCTAT
CACCTTATGG CAAAGAACCT CGGTAATTTG CCAATTATCC CATCCGGTGA TGCTTTTTAT
CAGGTTGCCA CCGACAGCAA ATGGGGTTTT AAAAAAGATA CTGCATTTGA TTATGCTAAC
CCTGTTTATC CTGCACTGCC TTCACAGCAA AACTCGATCA ATGTAGGCTA TAGCTGGGGG
AAAGACAAGA AACTACAGTT TGATCCCAAT CATGCAAATG AAGCAGGGTG CTATCTGGCA
GGTTTGGTAT GGTACAAGCA TTTGTTGAAG GGAGATCCAA CCAAACTGAA GTTTAAACCA
GCTGCTGTGT CGGATGAATT TGCCGCATTC CTGAAAGCAA CAGCTTCGAA GAATTAA
 
Protein sequence
MKILIKTKLV IVLVLTMCLQ LNAQQAGKTL KVLLIGNSFS QNASRYLPQM AEEAHVKLVL 
GRAEMGGCSL KRHWDSVLVN DIDTNRGKAY KGQSLRQLLQ SQKWDIVTMQ QYSLLSGDEG
TYQPYATKIY DLVKKYQPDA KVFVHQTWAY RADAVNWGMI ASEKRAENNR EMWEKSRAAY
HLMAKNLGNL PIIPSGDAFY QVATDSKWGF KKDTAFDYAN PVYPALPSQQ NSINVGYSWG
KDKKLQFDPN HANEAGCYLA GLVWYKHLLK GDPTKLKFKP AAVSDEFAAF LKATASKN