Gene Phep_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3541 
Symbol 
ID8254662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4214200 
End bp4215429 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content41% 
IMG OID644937192 
Producthypothetical protein 
Protein accessionYP_003093794 
Protein GI255533422 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.383323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.81555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAT TTACTTCCTT ACTTTTTTTA ACGCTTCTGG CGATCAGCAA CATCAAATCT 
ACCGCACAAA TTGCATCGTC AAAGCAAGGT ACATCCAAAA AGTCGGGAAT TGTCACAGGT
GCCGACCAGA CTGAAAAATA TTTGCCTTAT CTAAAAGGAA AACGAATTGG CCTGGTTGCA
AATCAGAGTT CCATTATCGG CAAAAAAAGC AGCGTAGATA GTTTAAAGAG CCTTGGAATT
AAAATTGTAA AAGTGTTTGG ACCTGAACAT GGTTTTAGGG GCAATGCCAG TAATGGAGCC
GTGGTAAACA ACGAGATAGA TGCGAAAACC GGCATTCCCA TCATCTCTTT ATACGGCAAA
AACGAGAAGC CAACAAAAGA ACAGCTGGCG GATATAGACC TTATGGTTTT TGATATTCAG
GATGTGGGCT GTCGCTATTA TACCAATATT AATACACTTG AGTATGTGAT GGAAGCCTGT
GCAGAAAACA ACAAAGAACT CCTGATTCTT GACAGACCTA ATCCTAATGC ATATGTAGTA
GACGGCCCGG TAATGACTGA TGATAAATTT AAATCTGCCA TAGGGATTCA TTATACACCC
ATGACGCATG GCATGACTAT CGGTGAGTTT GCACAATACC TTAACGGCGA GGGATACCTG
AAAGAAAGAT GCAGCATAAA GATTATAAAA GTTGCCAACT ATAACCATGA CATGTCTTAT
GTATTACCCA TACATCCTTC ACCAAATTTA AATACCCAGC AGGCTGTAAT GCTTTTCCCG
AGCTTATGTA TGTTTGAGGG AACAGCGATC AATGAAGGTC GGGGAACTTA TATGCCATTT
ACTATATTGG GAGCACCTGC ATTGAAAGGC AAGTATTCAT TTTCCTACAA ACCGGTAAGC
ATTCCCGGAA TGAGTGAGCG GCCAAATCAC AAAGACTCCG TTTGCTATGG CCTTGACCTT
CGCAATTATG ATATCAGCAA GCTTCGGAAG AGCCGCCAGA TTAATTTATC GTGGTTAATT
GAATTGTACA ATGCTTATCC GGATAAAGCC CGCTTTTTTG GTCAGGAAAG AGCCAGTACA
GGTGTATCTC CCTTTGATCT GCGTATAGGT ACCGATCAAT TAAGAAAACA GATCATAGCC
GGAGTATCAG AAGCTGACAT CAGAAAAAGC TGGGAGCCTG GATTGCAGAA GTTTAAGGCT
ATACGGGCGA AGTATCTCCT ATATCCGTAA
 
Protein sequence
MMKFTSLLFL TLLAISNIKS TAQIASSKQG TSKKSGIVTG ADQTEKYLPY LKGKRIGLVA 
NQSSIIGKKS SVDSLKSLGI KIVKVFGPEH GFRGNASNGA VVNNEIDAKT GIPIISLYGK
NEKPTKEQLA DIDLMVFDIQ DVGCRYYTNI NTLEYVMEAC AENNKELLIL DRPNPNAYVV
DGPVMTDDKF KSAIGIHYTP MTHGMTIGEF AQYLNGEGYL KERCSIKIIK VANYNHDMSY
VLPIHPSPNL NTQQAVMLFP SLCMFEGTAI NEGRGTYMPF TILGAPALKG KYSFSYKPVS
IPGMSERPNH KDSVCYGLDL RNYDISKLRK SRQINLSWLI ELYNAYPDKA RFFGQERAST
GVSPFDLRIG TDQLRKQIIA GVSEADIRKS WEPGLQKFKA IRAKYLLYP