Gene Phep_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3520 
Symbol 
ID8254641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4191190 
End bp4191708 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content39% 
IMG OID644937171 
Producthypothetical protein 
Protein accessionYP_003093773 
Protein GI255533401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATTA ATGAATACAT AAAAAGCGGA GCCCTGGAAG CTTATTTATC GGGCTCGGCC 
AGTGAAACAG AAACCCATAA ACTATTATAC CTTAAAGCAG TACACCCCGA AATTGACGAT
GCCTTGTACA GAATGGAAGT TGATCTGGAA AACCTGGCCA AATATATGGC GATTAAACCT
CCGACAAGGG TATGGGACAA AATTGATGAC AACCTTAAAG AACTGGCCAA AACAGAAGAG
GACCATCCGG GAATGTTAAA AGTCCATTCA AAAAGAATTG GAACTGAAGA GAAACAAATA
CCCGCCAAAG ATGGTCAGTT TATTGAAGTT GAAGGCTCCT CTACCCATAT GCGCATCCAT
AAAATATGGA GATGGATACT GCTGGGCATT TTTATACTTG GAAAAATATT TTTAGGCTTT
GCTATTTATT ATTACCTGGA AAACCGGCAG ATGATGAAAC AAATGGAAAA ACAACAGCAG
GAGCTAAGTA AAAAGAAACA AGGACAGCCT GAAAAATAA
 
Protein sequence
MDINEYIKSG ALEAYLSGSA SETETHKLLY LKAVHPEIDD ALYRMEVDLE NLAKYMAIKP 
PTRVWDKIDD NLKELAKTEE DHPGMLKVHS KRIGTEEKQI PAKDGQFIEV EGSSTHMRIH
KIWRWILLGI FILGKIFLGF AIYYYLENRQ MMKQMEKQQQ ELSKKKQGQP EK