| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3505 |
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| Symbol | |
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| ID | 8254625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4172884 |
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| End bp | 4173843 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937155 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003093758 |
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| Protein GI | 255533386 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATAC TGATTACGGC CCCTTACAAT GAGCAGGGAC AACAGACATT GGCAGAAAAA
CTGGGCGAAG TGGTTTATCG TCCATGGAAG GATCTTGGCC GTGCATTTCA TGAAGACGAA
CTGATTGAGT TGTTGGCAGA GACCAAAGCT GATGCCTTAA TTACAGAACA CGATCACGTT
ACCGCAAAAG TTATTACAGC TAATCCACAC CTTCAGTTTA TAGGCGTATG TCGTGGAACC
CCTTCCAACG TATCGCTGGA AACAGCTAAG GCAATGGGTA TCCCGGTATT TCATACCCCG
GCCAGAAATG CGCAGGCAGT AGCCGAAATG TTCCTGGCAA CGGTAATTGA CCTGATGAGA
AATACTTATG CCGGTGTGGC CTGGTTAAAG GACCGGAACT GGACAGCGGA TGCGCACACT
TCCTACCTGC AGTTTAAAGG GAACGAAATG GCTGGTAAAA CCATCGGTAT GGTTGGCTTT
GGTGCAGTAG GCCAGCGCAT AGCCAGTATG GTCGAGAACT TTCCGTGTTC CATTAAATTT
TACGATCCTT ACCTGGAAAA TTTTGATGCC AGGTATACCA AAACTTCACT GGAAGATGTA
TTTGCCAGCA GTGATATTGT TTCGATCCAC CTTCCCGTAA ATGAGGCTAC CATAGGAATG
ATCGATAAAA GCCTGATCTC GAAAATGAGA CCTGATGCCA TATTTGTAAA TACGGCACGT
GCCAGCGTAG TAAAACGTGA CGACTTGCTG GAAGCCTTGG AAAACAAGCG CATCAGAGGT
GCTGTGCTGG ATGTGTTTGA CCATGAACCG CCTGATGAAA AAGATTACCG CATCATTAAC
CTGCCGAATG TACTGGCTAC ACCGCACATT GCTGGGGCTA CGCATGAGGT AGAGGACCAC
CATGTCGAGA TCATGAACAA CAGGATCATG ACGTGGTTTG CACAGGAAAA GGTAAATTAG
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| Protein sequence | MRILITAPYN EQGQQTLAEK LGEVVYRPWK DLGRAFHEDE LIELLAETKA DALITEHDHV
TAKVITANPH LQFIGVCRGT PSNVSLETAK AMGIPVFHTP ARNAQAVAEM FLATVIDLMR
NTYAGVAWLK DRNWTADAHT SYLQFKGNEM AGKTIGMVGF GAVGQRIASM VENFPCSIKF
YDPYLENFDA RYTKTSLEDV FASSDIVSIH LPVNEATIGM IDKSLISKMR PDAIFVNTAR
ASVVKRDDLL EALENKRIRG AVLDVFDHEP PDEKDYRIIN LPNVLATPHI AGATHEVEDH
HVEIMNNRIM TWFAQEKVN
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