| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3497 |
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| Symbol | |
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| ID | 8254617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4162957 |
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| End bp | 4166067 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937147 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093750 |
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| Protein GI | 255533378 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.124606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC ACTTTTACAA AACGTGGTAT AGTTACAAAC CATGCAGTTT AATTTTAACG
CTGCTCCTGT TTGCAAATTT TGCTTTTTCG CAGGATAAGA CAGGATTGAT CAAAGGAAAG
ATAACTGATG ATTCTGGGCC TTTGCCGGCG GCATCGGTTT TGGTAAAAGG ACCTAAAAAC
GGAACAACTG CTGATGCGCA GGGTAATTTT AGCATCAGGG TTGCAGAAGG CACTTATACA
CTTACTGCCT CGTACATTGG TTATACTTCA GCAGATCAGG TGAATGTTAA AGTAACAGCC
GGCAAAGAAA CGGTGGTTAA TTTTAAACTG TCGTCAAATG TACAGCTGCA GGAAGTTCAG
GTAAGTTATG GTAAGCAAAG GGCCAGAGAG ATTACCGGTT CTGTTGCACA GGTAGATGCC
TCTACTTTGC AGGACATGCC GGTAAACCAG TTTGCACAGC AGCTGGCCGG TAAGGTTGCG
GGGGTGCAGG TGGCCCAGAC CAGCGGACAG CCAGGCCGGG GAATGTCCTT CCGTATCCGT
GGGGCTACTT CAACCAAGGC CGATAATCAG CCTTTGTTTG TGGTAGACGG GATGCCGGTT
ACAGGGAGTA TCAACAACAT TAATCCTGCA GAGATCGAAT CTTTCTCTAT CTTAAAAGAT
GCTTCTGCCA CGGCTTTGTA TGGCTCGCGC GCAGCAAACG GGGTTATCCT GATCACTACC
AAACATGCCA AATCTGGTGA TGCCAAGATC GAGTTCAATG CCAATTATGG TGTGCAGAAG
ATCCCGGAAA ACCGGGTTCC CCAAATGATG AATGCCCGGG AATTCGCTAC TTATATGAAA
AACAGGTACG AGGACCAGAA AATATATGTG CCTACATTTG TTCCGCCAGC GGATCAGGTA
GCTGCTTATG GCAATCCTGA GCAATATGGC GAAGGTACCA ACTGGTTTAA ACTGATGACC
AGGACAGCGC CCATACAGGA TTATAATGTA AGTTTTCAGT CGGCCCGCGA AAAATCTTCT
TCTACGGTTA TTGCAGGGTA TCTGGAACAG CAGGGAGTAC TGATCAATAC TTCAACCAAA
CTGTACTCTT TACGTTATAA TGCAGACCTT TCTTTAAGCA ATAATAAATT AAAGATAGGG
GTTAACGTAG CACCAAGTTA TCGACTGGAC CACAACAACA GGGTAAGTAC CGATGGTGTT
GGCGGATGGT TTGAGAACGG TATGGAGGCC AGTCCGTTGG AAACTCCTTA TAACGCCGAT
GGTTCTTTAA AAAGATTTGT AAAATCGCCG GGTATGGTAG ATTACATCAA CCCGGTAGCC
AGGTTTCTAG GTACCAAAGA CGATTATATC ACTACCCGGA TACTGGGAAA TGCTTATTTA
AACTATGAAT TTTTACAGGG CTTAAGCTTA AAAACGAATT TTGGTGTAGA TAAAGGTTTT
GAAACCCGCA ACAATTTTAT ATCAGGAGTA ATTGCACCAA CACAAGGAGT ACCTACTGCT
ATCAACCAAT CTTTTGATAA CGGATCGTAC ACAGCGGAAG CAAACCTGGT ATACAATAAA
ACCTTTGGGA CCGATCATCA CATTGAGGCC CTGGGTGGAT ATTCCGTACA GCAGTACAGG
GGATATAGTG CGACCATCAA CGGTACCAAT TTTCCAAGTG ACGATATCCA GTATCTTTCT
GCTGCTACCA GCATTACATC GGCTACAAGT GGTTTAAGTG AATATTCCCT GATGTCGACT
ATTGGCCGGT TAAATTATAA TTATAAGGGT AAATACCTTT TGTCTGGAGC CATACGCCGT
GATGGTTCAT CAAGGTTTGG GGCAAATAAA AGGTATGGTA CTTTCCCTTC TGTATCGGCA
GGTTGGGTAA TGAGTGATGA AAATTTTATG AAGGGCTTTA ATTTTGTAGA TCTGTTTAAG
ATACGTGCAA GTTATGGTAT TGTAGGAAAC AATGCATTCG GAAATTACGA AGCGCTGGCC
ACTATGGGGC AATCCAATTA TATTTTAAAT GGCGCATTGG CTTCCGGGCA GGCCATTACC
CGTTTAGAGA ATGCTGAGCT TGCCTGGGAA CGCAACAAAC AGTTTGATGT GGGCTTTGAT
CTTTCTGTTT TAAAGAACCG GGTAAGTATC ACTTATGATT ATTACCATAA GGTTTCGGAC
GGACTGATCC AGGACAGGCC TATTCCATGG GCATCCGGCT TCAGGTCGAT CTTATTTAAT
GTTGGGGAGA TTGAATTCTG GGGGCATGAG TTTTCTGTAA ATTCCGAGAA TTTAACGGGT
AAATTAAAAT GGAACTCCAA TTTTAACATC TCATTTGATA GGAACATCAT CAACAACCTG
GTAGCACCTG GCTTTGTAAG AAGAAATACC GGTGTATCTT CCGATTACTT TCGCCAGCAG
ATTGGTCACC GCTTAGGTGA GTTTTATGGC TTTGTGTTCC AGGGCCTCTA CACGGCTGCT
GAAATAGCAG ATCCTACAGT AGCCAAGTAC AGGAATTCTG CCGAAGGTAC CTTGAAAATG
AAAGACATCA GCGGACCAAA TGGTGTTCCG GATGGCATCA TCTCTGATGA ATACGACCGT
ACTTTTATCG GCGACCCGAC CCCTGATTTC AATTTTGGGT TTACCAACAA TTTTACCTAC
AAAAACTTCG ACCTTAACAT TACTATGGCC GGCTCTGTTG GTGGCAAGTT GCTGAATGCG
GCCAAATGGG CTTATGCAAC CAATTTGGAC GGTTCGAGGG TGATGCTGAA AGCTGCTGCA
GACCACTGGA GATCGGCAGA TAACCCCGGT TCAGGAATTT ATCCTACAAC CCGATATAGT
ACAACAGATA TGGGGCGTCA GGTGAACAGC CAGTGGGTAG AGAGCGGATC TTATCTGGCA
GCAAAAAACA TTTCACTGGG CTACCGTTTC AATATGAAAG GTAAAACGCT GCTCCAGAAT
TTCAGGGTTT ATGCATCTGT ACAACAGGCT TTTGTAATAA CAGGCTATAG TGGGATGAAC
CCGGAGATCA GCTTTGACGG CACCGATGCT TTTAAAGGAA TCGGGGTAGA TGAAAATGGC
TATCCGGTTC CAAGAACATT TTCAATCGGT ATTTCAACAA CATTCAGATA G
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| Protein sequence | MRKHFYKTWY SYKPCSLILT LLLFANFAFS QDKTGLIKGK ITDDSGPLPA ASVLVKGPKN
GTTADAQGNF SIRVAEGTYT LTASYIGYTS ADQVNVKVTA GKETVVNFKL SSNVQLQEVQ
VSYGKQRARE ITGSVAQVDA STLQDMPVNQ FAQQLAGKVA GVQVAQTSGQ PGRGMSFRIR
GATSTKADNQ PLFVVDGMPV TGSINNINPA EIESFSILKD ASATALYGSR AANGVILITT
KHAKSGDAKI EFNANYGVQK IPENRVPQMM NAREFATYMK NRYEDQKIYV PTFVPPADQV
AAYGNPEQYG EGTNWFKLMT RTAPIQDYNV SFQSAREKSS STVIAGYLEQ QGVLINTSTK
LYSLRYNADL SLSNNKLKIG VNVAPSYRLD HNNRVSTDGV GGWFENGMEA SPLETPYNAD
GSLKRFVKSP GMVDYINPVA RFLGTKDDYI TTRILGNAYL NYEFLQGLSL KTNFGVDKGF
ETRNNFISGV IAPTQGVPTA INQSFDNGSY TAEANLVYNK TFGTDHHIEA LGGYSVQQYR
GYSATINGTN FPSDDIQYLS AATSITSATS GLSEYSLMST IGRLNYNYKG KYLLSGAIRR
DGSSRFGANK RYGTFPSVSA GWVMSDENFM KGFNFVDLFK IRASYGIVGN NAFGNYEALA
TMGQSNYILN GALASGQAIT RLENAELAWE RNKQFDVGFD LSVLKNRVSI TYDYYHKVSD
GLIQDRPIPW ASGFRSILFN VGEIEFWGHE FSVNSENLTG KLKWNSNFNI SFDRNIINNL
VAPGFVRRNT GVSSDYFRQQ IGHRLGEFYG FVFQGLYTAA EIADPTVAKY RNSAEGTLKM
KDISGPNGVP DGIISDEYDR TFIGDPTPDF NFGFTNNFTY KNFDLNITMA GSVGGKLLNA
AKWAYATNLD GSRVMLKAAA DHWRSADNPG SGIYPTTRYS TTDMGRQVNS QWVESGSYLA
AKNISLGYRF NMKGKTLLQN FRVYASVQQA FVITGYSGMN PEISFDGTDA FKGIGVDENG
YPVPRTFSIG ISTTFR
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