Gene Phep_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3485 
Symbol 
ID8254605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4146219 
End bp4146716 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content43% 
IMG OID644937136 
Producthypothetical protein 
Protein accessionYP_003093739 
Protein GI255533367 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC AGAAAAAAGA AATATTCGAC AGTGTAGCAC AGCGTTTAAA AATTGAGGGT 
TTTAATGTGG TTAACCGCGA TGAGACCCGT CCCTGGGGTG GTTTTTTTGT AATCGATGAA
GAACAGGCAC AACAGTTTGC CAATGTATAT TTTGACAAGC TAAATGTTGA CGATTTAAAA
ATTTCAGGTA AACTGAGCCC TAAAATATTA ATTGTTGCCC CAAATACCAG GCTTTCGTGG
CAGTACCATC ACCGTCGTGC AGAAATCTGG AGGGTGGTGA ACGGAACTGT AGGGGTAAGT
ACCAGCGATA CAGATGAGCA GGGCCCCGTG CAGCAACTTG CACCAGGACA AACCATTAAA
TTAAAACAAG GAGAACGTCA TCGTTTAATT GGGTTGGACG ATTGGGGTAT CGTTTCGGAA
ATATGGCAGC ATACTGACCC TGAAAACCCC TCGGACGAAA ATGATATTGT AAGGGTTCAG
GATGATTTTG GCAGGTAA
 
Protein sequence
MSDQKKEIFD SVAQRLKIEG FNVVNRDETR PWGGFFVIDE EQAQQFANVY FDKLNVDDLK 
ISGKLSPKIL IVAPNTRLSW QYHHRRAEIW RVVNGTVGVS TSDTDEQGPV QQLAPGQTIK
LKQGERHRLI GLDDWGIVSE IWQHTDPENP SDENDIVRVQ DDFGR