Gene Phep_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3478 
Symbol 
ID8254598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4140675 
End bp4141721 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content45% 
IMG OID644937130 
ProductFructose-bisphosphate aldolase 
Protein accessionYP_003093733 
Protein GI255533361 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3588] Fructose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTGA TGATGAATTT ACAAGAACTT AAGCATACAG CACAAAGGCT TATGGCCAAT 
GATAAAGGTT TATTGGCTAT GGACGAGAGT TTAGGTACCT GCAATAAGCG GTTTAAGGCT
CTGGGAATTC CAGAAACAGA GGAATATCGC CGGCAATACC GGGAGTTGAT TGTAACTACC
CCCCATTTGG AAGAAAGCAT TAGCGGCGCT ATTCTATTTG AGGAAACGCT TTATCAAAAG
ACAGAAACTG GCACTCCATT TCTGGAGATT CTGGACCATA AAGGAATTAT TACCGGAATA
AAAGTAGATC AGGGCGCTGT TGCCTTACCT GGCTTTCCTG CTGAGCAGGT TACCGAAGGC
CTTGACGGTA TGCAAAACCG TTTGGCCACC TACTATAAAC TAGGTCTGCG TTTTGCTAAA
TTCCGTGCAG TCATTAACAT TGGTCGTGAT ACGCCAACCA ATACAGCGAT CAGAATAAAT
GCGGTAACCC TGGCAAGGTA TGCCGCGCTT TGTCAGGAAG CCGGAATTGT ACCTGTTGTA
GAGCCTGAAG TACTGATGGA TGGAGACCAT ACACTCCATC AATGTGCCGA AGTTACACGT
ACTGTCTTAA AAGAAGTTTT TAACGAACTG TACGAACAAA GGGTGCAGCT GGAAGGAATG
ATCTTAAAAC CCAATATGGT TTTACCAGGA CTCAGTTGCC AGGATCAAAG TCATATTGAA
GACATTGCTG CTGAAACAAT TTCTTGTTTT TTACAGGTAG TTCCGGCCGC AGTTGCTGGT
ATTGCATTCC TGTCGGGCGG GCAGTCGGCA ACTCTCGCTT CAGCCCGTTT AAATATGATG
CACCAAAAGT TCGGCACGGT AATACCTTGG CCTTTAACCT TTTCTTTTTC AAGGGCGATT
CAACAACCTG CTTTAGAAAA ATGGAGCGGT AAAGCAGAAA ATGTAGCAGC GGCCCAGCAA
ATGCTGGCAC ATCGTGCGGC CTGTAATAGT GCGGCACGAA GAGCTGAATA TAGTCCGTCT
ATGGAAACCA ATAAACGGGA GCCATAA
 
Protein sequence
MRVMMNLQEL KHTAQRLMAN DKGLLAMDES LGTCNKRFKA LGIPETEEYR RQYRELIVTT 
PHLEESISGA ILFEETLYQK TETGTPFLEI LDHKGIITGI KVDQGAVALP GFPAEQVTEG
LDGMQNRLAT YYKLGLRFAK FRAVINIGRD TPTNTAIRIN AVTLARYAAL CQEAGIVPVV
EPEVLMDGDH TLHQCAEVTR TVLKEVFNEL YEQRVQLEGM ILKPNMVLPG LSCQDQSHIE
DIAAETISCF LQVVPAAVAG IAFLSGGQSA TLASARLNMM HQKFGTVIPW PLTFSFSRAI
QQPALEKWSG KAENVAAAQQ MLAHRAACNS AARRAEYSPS METNKREP