| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3464 |
|---|
| Symbol | |
|---|
| ID | 8254584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4115911 |
|---|
| End bp | 4116966 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644937116 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093719 |
|---|
| Protein GI | 255533347 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0382071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA ATCATCTGGC AGGCATTATC CTAATTAGTG CAACAACAAT AGGGCTATTT
ACCAGCTGTG CGTCCGACGC AAAAAAAGCG ACGGGAAAAA CAAAGATCAC GGCTTCTGGT
GATACTGTAG CGGTTGAAGA GGCAGTTGAA GAAACGAATA CCCGTGTGCC GGTTGATACA
GCTAAGTATA ATACATTGTT AAAAAAACTG GCAAATGGTG ATACTACTGG CAAATGGCCT
GTAAAAAACC AGCCTTACCC CCTTGCAGGT GCTATACTTC CTTTTAAACG TATTGTGGTG
TATTACGGAA ACCTCCATTC TAAAAAAATG GGAGCACTGG GCGAATACGC TCCTAAAGAA
ATGTGGAAAA GGCTGAATGT TGAAATTAAG CACTGGGAAA AAGTAGATCC CAGTACCCCT
GTACAGGCAG GCCTGCATTA TATTGCTGCT GTGGCCAGTG GTACAGCAGG AAAAGATGGC
AAATACATTA ACCGTATGGC CAACTCACAA ATCGATTCTG TATTGGCAAT AGCCAAAATG
CGTCCGAATA CCATTGTATT TTTAGATTTG CAGGTTGCAC TGAGCAGTAT TAAAGCAGAG
CTTCCTCATA TCGAAAAATA TTTACAACTA CCTTATGTTC ATTTAGGGAT AGATCCGGAG
TTTTCTATGA AAGATGGTTC ACTTCCGGGA AAAAAGATCG GTACGTATGA TGCAGCAGAT
ATCAATTATG TTTCTCAATA CCTTGCGGAT ATAGTGAAAA AATACAATCT GCCACCTAAA
GTATTTACTG TGCACCGTTT TACCAAGAAA ATGGTAACCA ATTATCAGAA CATCAAACTA
CGTCCGGAAG TGCAAATTGT AATGCACATG GATGGATGGG GCGAACCGGA ACTTAAAAAG
GGCACATACC GTCACTTTAT CTATTCGGAA CCGGTACAGT TTACCGGATT TAAACTGTTT
TATAAAAACG ACCTGAAAAA AGCACCCAAT AGGCTAATGA CACCGGAAGA CCTGATGAAA
TTAAAGCCTG TGCCAATTTA TATTCAATAT CAGTAG
|
|---|
| Protein sequence | MKLNHLAGII LISATTIGLF TSCASDAKKA TGKTKITASG DTVAVEEAVE ETNTRVPVDT
AKYNTLLKKL ANGDTTGKWP VKNQPYPLAG AILPFKRIVV YYGNLHSKKM GALGEYAPKE
MWKRLNVEIK HWEKVDPSTP VQAGLHYIAA VASGTAGKDG KYINRMANSQ IDSVLAIAKM
RPNTIVFLDL QVALSSIKAE LPHIEKYLQL PYVHLGIDPE FSMKDGSLPG KKIGTYDAAD
INYVSQYLAD IVKKYNLPPK VFTVHRFTKK MVTNYQNIKL RPEVQIVMHM DGWGEPELKK
GTYRHFIYSE PVQFTGFKLF YKNDLKKAPN RLMTPEDLMK LKPVPIYIQY Q
|
|---|
| |