Gene Phep_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3440 
Symbol 
ID8254560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4091496 
End bp4094057 
Gene Length2562 bp 
Protein Length853 aa 
Translation table11 
GC content41% 
IMG OID644937092 
Producthypothetical protein 
Protein accessionYP_003093695 
Protein GI255533323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTTC GTTCAATAAC AGTCAGGTTT ATTATTTTGT TAGCTATGGT TATACCTGGT 
TTTCAATCTT ATGCACAGCA AACGGCTGTT AGCGGAACGG TTACAGACGC CAGCACTAAA
GAAACCATTC CTTATGCATC TTTTATCATT ACCGGAAGTG GAAAAGGAGG GCGCACAGAT
GCCGATGGAA AGTATAATAT TACCATTAGT GGCAATTATA CCCAGCTTAA ATTCAGTTAT
ATAGGTTATA AAACCCAGGT TAAAACCATT AAGCCGGGGC AGGCCCAAAC CATTAATGTA
CAGCTGCAAA ATGAAGCCAT GCAGATGAAC GAGGTAGTGA TCAAAGGTGG CAAGAAGCCC
CCTTACCGCA ATAAAGAGAA CCCTGCAGTT GAACTGATCC GTAAGGTAAT TGCCAATAAA
CCGAAAAACC GCATGGAAAG CTATGATTAC GTCGCTTATC AGAAATATGA AAGAATGTTG
TTCTCTATGA GCAACCTTTC AGAGAAATTT AAGAACAAAA GAATATTCCG CAATTATCAG
TTCCTTTTTC AGGAACAGGA TTCTACAAAA ATAGGTGGCA AAAATATGCT TCCGGTGTTT
CAGCAGGAAA AGCTTTCTGA TAACTATTTT CGCAAAAATC CGGAGAAGTT AAAAACTGTG
GTCATAGCCG ATAAGCAGGT GAACTTCGAT GAGCGTTTTA TAGACAACCA GGGTTTAAGT
TCTTATTTCG ACAGGATGTA CCAGGATATT GATATTTATG ACAACAATAT CTCTGTAGTA
AGCAATCTGC TGCTAAGCCC GATTGCTGAT GGCGCACCTG GTTTTTACAA ATTTTTTATT
ACCGATACCA TCCGTACACA ACAGCCCCAG CTGATTGAAC TTTCCTTTAC ACCCAGAAAC
AAGATGGACC TTTTGTTTGA AGGTAAGCTG TATGTAACCA TGGATGGAAA TTATGCCGTC
CAGAATGCTT TTTTAACCGT AAATAAAAAC ATTAACCTGA ATTTTGTTCG GGCATTAGAG
GCCAAACTTG AATTTGAACA GAATGCGGAC AACCGTTACC ACTTAAGTAA GAGCAACCTG
ATTGTTGATT TTGGCATCAC CAAGAAAAGC GGGGCTGGTT TTACAGGCGA AAGGACCGTT
ACCTATAAAG ATTACAAAAT AAATGAGCCG ATAGCCGATA GCGTATACAA AGGCTCGGCT
GCCCTGGTTG TGGTACCGGA TGCGAAAAAG AAATCTGAGC AGTTCTGGAC CAGTAACCGT
CCTGAAGCGC TGAGCACCAC CAGTGCTAAA GTGTACCGTA ATCTCGATAC CCTGCAAAGC
ATTCCATCGT TTAAACGAAC TATGGATATT GTAACACTGT TTTTTGCGGG ATATAAAGAT
TTTGGTCCTT TTGAAATGGG GCCGGTAAAT ACCTTTTATA GTTTTAACAG TGTTGAGGGC
TTTCGTTTGC GTTTAGGTGG CCGTACCACA ACTGCTTTAA GCAAGCGCTA TTATTTTGAA
ACTTACGCAG CCTATGGCTT TGAGGATCTG AAATGGAAGT ATTTCCTGAG CGGGACCTAT
TCCTTAAACA ACAAGTCAAT TTATGCTTTC CCTCAAAACT ATGTGCGCGC CAGTTTCCAG
CGGGATACCA AAATTCCTGG ACAGGAGCTG CAGTTTGTAC AGGAAGATAA CTTTTTGCTT
TCCTTTAAAA GGGGGGAGAA CAACATGATG CTGTACAATG ATTTTTACAG GCTTGATTAT
GTCCATGAAT TTGAAAATCA CTTCTCCTAT AGCCTTGGCT TACGTAAATG GAGCCAGACA
CCAGCAGGTT CTTTATATTT TAACAACTCG GCGCAAACAC TGTTTTCAAG AACCAACCAG
ATCAATACAT CCGAGATCAG TGTGAACTTA AGGTATGCGC CGCACGAAAA ATTTTACCAG
GGTAAGGTTT ACCGCACGCC ACTGGTTGAT AAGTATCCGA TATTTAACCT GCGTTATACT
GCAGGCCTGA AAGGTGTTTT AGGCGGTGAG TATAACTACC ACAATTTTAT GGGTAGTATC
GATAAGCGTT TTTATTTATC GCAATTGGGC TATACCGATG TAACAGTTGA AGGAGGATAT
GATGTGGGCA AACTACCTTT TCCGCTGTTG TCTATCCACC GCGCCAATCA GACTTATGCT
TACCAGTTGC AATCGTATAA CCTGATGAAC TTTCTGGAGT TTGTAAGTGA CCATTATGCA
AGTATCAATA TAGACCAGAA TTTTAATGGT TTCTTCTTTA ATAAAATCCC TTTGCTGCAA
CATTTAAAGT TAAGGGAAGT GATGTCCTTT AAAGCTTTAT ATGGCGGCCT GCGCAATGAA
AATAACCCCG CCAAAAATAC AGATGCCATG CAGTTTGTAC GCAATAGCGA TGGTATGCAG
ATTACCAACG CACTGGACAA TGGCCCGTAC ATGGAGGGTA GTGTTGGTAT AGGAAATATC
TTTAAGGTGT TAAGAGTTGA TGCCGTAAAA CGTTTCAGTT ACCTGGACCA TCCAAACGTT
TCTTCATGGG GAATCCGGGC CAGGGTTAAA TTTGATTTTT AA
 
Protein sequence
MFLRSITVRF IILLAMVIPG FQSYAQQTAV SGTVTDASTK ETIPYASFII TGSGKGGRTD 
ADGKYNITIS GNYTQLKFSY IGYKTQVKTI KPGQAQTINV QLQNEAMQMN EVVIKGGKKP
PYRNKENPAV ELIRKVIANK PKNRMESYDY VAYQKYERML FSMSNLSEKF KNKRIFRNYQ
FLFQEQDSTK IGGKNMLPVF QQEKLSDNYF RKNPEKLKTV VIADKQVNFD ERFIDNQGLS
SYFDRMYQDI DIYDNNISVV SNLLLSPIAD GAPGFYKFFI TDTIRTQQPQ LIELSFTPRN
KMDLLFEGKL YVTMDGNYAV QNAFLTVNKN INLNFVRALE AKLEFEQNAD NRYHLSKSNL
IVDFGITKKS GAGFTGERTV TYKDYKINEP IADSVYKGSA ALVVVPDAKK KSEQFWTSNR
PEALSTTSAK VYRNLDTLQS IPSFKRTMDI VTLFFAGYKD FGPFEMGPVN TFYSFNSVEG
FRLRLGGRTT TALSKRYYFE TYAAYGFEDL KWKYFLSGTY SLNNKSIYAF PQNYVRASFQ
RDTKIPGQEL QFVQEDNFLL SFKRGENNMM LYNDFYRLDY VHEFENHFSY SLGLRKWSQT
PAGSLYFNNS AQTLFSRTNQ INTSEISVNL RYAPHEKFYQ GKVYRTPLVD KYPIFNLRYT
AGLKGVLGGE YNYHNFMGSI DKRFYLSQLG YTDVTVEGGY DVGKLPFPLL SIHRANQTYA
YQLQSYNLMN FLEFVSDHYA SINIDQNFNG FFFNKIPLLQ HLKLREVMSF KALYGGLRNE
NNPAKNTDAM QFVRNSDGMQ ITNALDNGPY MEGSVGIGNI FKVLRVDAVK RFSYLDHPNV
SSWGIRARVK FDF