| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3409 |
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| Symbol | |
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| ID | 8254528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4060148 |
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| End bp | 4061179 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937061 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003093665 |
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| Protein GI | 255533293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.180337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TAAAACGCAT CTGCAAACTG TTTCCGATAC TATTATTGCT CCTGTATACA
GGCTGTAAAA AAAAGGCAGC GGTACCAGCG GATGATGCAG AACAAATTGC AGCCAGCGAA
CTGCTGGATT ATTACCTTGT TGGGGAACAT ACAACAGGTG GAAATAAATT AATCGTGCTG
TATTTTACCC AGGAGGGCAA TGTAATCAAG GCCAATGCAC ATTTACAGGG TTATTTCAGG
GCCAGGGAAG TGGTTATCAA AAATTCGGTA ATTACTATTG ATTACAATGG AGATGGAAAA
TCAATGTACA CCTTTACCCT TGAAAAAGAT GCTGAAGGAA AGTTAAAGCT AAAGTCTTAC
GATTTCCGTT ACAATGGTGC AGGCAACCAG TTGGCTTATG CCATAATGGC TAAAAAATCA
GAGGCTTTTT CATTTGCAAA CTTGTCCTTT AAGACGGGCA ATACAATGTT TAGCTTTACC
ACCGATGGGG GTACAGAGAT TATAAATTGG CCAGGTGACC CCAGTCCTTA TTATAAACTT
ACAAACATTG GCTTTAAAAC AAATAATGAC AAATTTTTGG GAGTAACGGT TCCAGGCTGG
AATGGCGTCG TCGTACCGGT TATGCTGCTT GAAAAAGACG AAGCATTATT TGTTGCAAAA
GAACAGGATG CCCAACCACC CCAACCCGCT TGTAACCTCA TACTTCCAGG CGTATCTTTT
AAATCGCAAT CCACAAAGCT AGCCACCAGC GAAGAGACAA TTTTATCCTC CGTGGCGCAA
ACTTTAAGAG GTAGTTCCGG CTGTAAGGTG GTGGTTACAG GATATTGCAG TAGTAGCCTT
ACAGATCGGC AGTTAAGCTG GAGGAGGGTA GAAAGTGTCA TTCAATATCT TACAGAAAAA
CAGGGCATCG ACGGCTCAAG GTTCATTTTC AAATATGCGC AACCAGGTAA TGATTGTAAT
GAAGTAGACC TGACGAACGC CGCACAGGGT CAGCCGGATG GGGGAGTGAT TCCACCTTTC
CCAGCCCAAT AG
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| Protein sequence | MKNLKRICKL FPILLLLLYT GCKKKAAVPA DDAEQIAASE LLDYYLVGEH TTGGNKLIVL
YFTQEGNVIK ANAHLQGYFR AREVVIKNSV ITIDYNGDGK SMYTFTLEKD AEGKLKLKSY
DFRYNGAGNQ LAYAIMAKKS EAFSFANLSF KTGNTMFSFT TDGGTEIINW PGDPSPYYKL
TNIGFKTNND KFLGVTVPGW NGVVVPVMLL EKDEALFVAK EQDAQPPQPA CNLILPGVSF
KSQSTKLATS EETILSSVAQ TLRGSSGCKV VVTGYCSSSL TDRQLSWRRV ESVIQYLTEK
QGIDGSRFIF KYAQPGNDCN EVDLTNAAQG QPDGGVIPPF PAQ
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