| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3405 |
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| Symbol | |
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| ID | 8254524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4052978 |
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| End bp | 4054780 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937057 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093661 |
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| Protein GI | 255533289 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.363725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTACA AATATATATT CAGCACGCTA TTGATGCTGT CAATTTTAAC GGTAACCTCC
TGCCGCAAAG ATTTTCTGGA AAAAACACCG GAAGAAGACA TTACCATTGA GGAAGCCTTT
CAAAAACGAA ACTATGCAGA ATCATTTTTG ACAGATATCT ATGCTGGCTT GCCCAACGAA
ATTTATTTCA CTGACATGGC AGACATCAAC CCTTTTGTCG TAGCCTCGGA TGAGCTCAAT
ATCCCCTGGC CGGAAAAGTT TGGAAAATTA ATGAACAAAG GATCCTGGAA TAGCTTTAAT
GTGGCCGGAC AGATCTGGAA AAATATGTAT GAAGGTATTA GAAAGGCAAA TGTATTTCTG
AAATACATTG AACTAACGCC GGTGGATGCT GATTTTACAC AGCAACAAAA AAACATCTGG
ATAGCTGAGG CCATATACCT TCGGGCATTT TATCATTTCC AGTTAATGCG GATCTATGGG
GCAGTTCCCA TTTTGGATAA GGCGTTGAGT GTAGATGAAG ACTTCAATTC AATCCGACGC
AAACCCTTAC AAGAATGCAT AGAGTTTGTG GTAAGTCAAT GTGATGCTGC AGCCGCAGTG
TTGCCCATGA CCCGATCAGA TTTACGTGAA CTTGGTCGCC CAACTGGTGC CGCTGCCCTG
GCAATGAAGT CCAGAGTATT GCTTTATAAC GCCAGTCCGC TTTGGAACGG AAACCCGGAC
TATGCCAACT TTAAAGACAA TGCCGGCACA CAACTTTTTC CCCTGCAGTA TGAGGATGCC
AAATGGGAGC GGGCAGCAGT TGCAGCAAAA GAATGCATAG ACAAATGTGA AGAAGCCGGT
TATAAGCTCT TTCGCGCTTA TCCAACTGAT CCGGTAAAGA ATTATCAGCA GCTATTTATC
GAAAATAACA ACTCCGAAGT GCTGTTTGCA CGCAATTCAG GTAGAGATGG CTGGATGGAA
AAATGCTCCT TTCCCGGAAG CTTAGGGGGA TGGAATGGAT GGAACCCAAC CCAGGGCCAG
GTAGATGCTT ATGAAATGGC CAACGGCGAA ACCCCGATTA CCGGTTACAA TGCCAACGGT
GCACCAATCA TCAATAGCAC ATCAGGCTAT GTAGAAACAG GGTTCAGCAC AACATCAAGT
CCGAACAGAT GGGCTGCCGG TGTAAGAAAT ATGTACATCA ACCGCGATCC GAGGTTTTAC
GCTACCGTTA ATTTCAATGG TTCAGTATTT GTCAACAGAC AGTTGCAGTT CTGGACATCG
GGTGCAGATG GCAAAAATAC GGCAGGCCGT GACTACAATA CAACCGGTTA TCTGTTGAAA
AAATTTGCAG ACCCATCTGT AATTATATCT CAAGGGAAAT TTTCATTGAA AACGTGGATC
TATTACCGTC TGGGTGAAAT TTATCTCAAC TATGCCGAAG CCCTGAACGA ATCTAAAGGG
CCTGTCGCCG ATGTATACAC CTATATGAAC GCCATACGAA ACCGCGCCGG GATGCCATCA
CTGCCAGCAG GCCTGTTAAA AGATGACATG CGCGCCAGGA TCCGTCATGA ACGGAGGATT
GAACTGGCCT ATGAAACACA CCGGTATTTC GATACACACC GTTGGAAAAT CGCAGCAACT
ACAGACAGCA AACCGGTATA TGGGATGAAC ATAACCGCCG GAAGTTCTCT GACAGATGAA
AGTTATTACA TCAGGACACT GGTCGAAACA AGGGTTTTCC AGGGTCCAAA ACATTACCTG
TTCCCATTGC CGCAGGGTGA AGTGGATAAG GCACCAAATA TTATACAAAA TCCAGGATGG
TAG
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| Protein sequence | MNYKYIFSTL LMLSILTVTS CRKDFLEKTP EEDITIEEAF QKRNYAESFL TDIYAGLPNE
IYFTDMADIN PFVVASDELN IPWPEKFGKL MNKGSWNSFN VAGQIWKNMY EGIRKANVFL
KYIELTPVDA DFTQQQKNIW IAEAIYLRAF YHFQLMRIYG AVPILDKALS VDEDFNSIRR
KPLQECIEFV VSQCDAAAAV LPMTRSDLRE LGRPTGAAAL AMKSRVLLYN ASPLWNGNPD
YANFKDNAGT QLFPLQYEDA KWERAAVAAK ECIDKCEEAG YKLFRAYPTD PVKNYQQLFI
ENNNSEVLFA RNSGRDGWME KCSFPGSLGG WNGWNPTQGQ VDAYEMANGE TPITGYNANG
APIINSTSGY VETGFSTTSS PNRWAAGVRN MYINRDPRFY ATVNFNGSVF VNRQLQFWTS
GADGKNTAGR DYNTTGYLLK KFADPSVIIS QGKFSLKTWI YYRLGEIYLN YAEALNESKG
PVADVYTYMN AIRNRAGMPS LPAGLLKDDM RARIRHERRI ELAYETHRYF DTHRWKIAAT
TDSKPVYGMN ITAGSSLTDE SYYIRTLVET RVFQGPKHYL FPLPQGEVDK APNIIQNPGW
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