Gene Phep_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3348 
Symbol 
ID8254467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand- 
Start bp3972318 
End bp3972881 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content43% 
IMG OID644937000 
Producthypothetical protein 
Protein accessionYP_003093604 
Protein GI255533232 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0850348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTC AACAATATCA GGATTATTTT CAGGAGATTT TATCAGATCC AAACGCCGCT 
GCACCCTACA ACAATATAGA CTATCTGGAT TATACCAAAT TGAACTGGAC ACGCCAGCAA 
CGCTGGTTAA AGACAGGAGT AGTGGATGCT GTTCTGGCAG AAACGATAGC TGCCATAAGG 
AATGCCCGGC AATGGATTGT TATTACTGAA CCTTGGTGCG GGGACGCCGC TCATACAGTT 
CCGTTTATTC ATAAACTAAC ACAACTCAAC AATTTAATCA GTGTTTCTTA TCAGTTGAGA 
GATAGTGAAC CTTTCTTAAT TGAGCAATAC CTGACAAATG GTAGTAAGGC CATTCCTAAA 
CTGATCATCA GGGACGAAGC GGGAAATGAT TTGCTGACCT GGGGTCCAAG ACCCCTGGAG 
TGCCAGGCTA TATACAATAA TTTAACAGCA GCGCATGCCG ATTTTGGAAC GATTAAAACA 
GAACTCCAAA AGTGGTACAA CCAGGATAAA GGTAAAAGTT TTCAGCGGGA ATTGCTGGAG 
GTTCTGGGTA AGGTAACCGG ATAA
 
Protein sequence
MDFQQYQDYF QEILSDPNAA APYNNIDYLD YTKLNWTRQQ RWLKTGVVDA VLAETIAAIR 
NARQWIVITE PWCGDAAHTV PFIHKLTQLN NLISVSYQLR DSEPFLIEQY LTNGSKAIPK 
LIIRDEAGND LLTWGPRPLE CQAIYNNLTA AHADFGTIKT ELQKWYNQDK GKSFQRELLE 
VLGKVTG