Gene Phep_3294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3294 
Symbol 
ID8254413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3906187 
End bp3907029 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content39% 
IMG OID644936946 
Producthypothetical protein 
Protein accessionYP_003093550 
Protein GI255533178 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.493511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCAG TAGTATACAG CGGATCGAAG ACAGCTTTCT GGAAGATTGC CAGGGACGGG 
AAGACGATTG CCGAATGCAG TATGCCGGGC ATAAACCCTT GCTTTAATGA TCAAAAAACC
ATTCTTCAAT ACCTGAATAA AAAGGCAACA CTGATCAATC ATGCAGAAAG CATCAAAAAG
ATCTACGTTT TTGCCGCTGG TGCTTCGTCT GATGAACGCA GGGATGAACT GGCCGAAACA
TTGGGCATGT TTTTCAGGTA CAGCAAGATC AGCGTTAAGG ACGACCTGTA TGGTGCTGCG
CTGTCTGCCT GCTTTAATAG CAGTGGCATT GTAGGAATTT TAGGCAGCGG AGCCAATTGT
GCTTATTTTG ATGGTAAAAA ACCTGAAAAG AACAATTACG GCCTGGGCTA TGTTTTTGGA
GACGAGGGCT CTGCCAATTA TTTGGGTAAA GTGATTCTAA AACGTTTTTT ACAGAAAAAA
CTTCCGGCAG ACCTGTTAAA AGAATTTGAA CTTAAATACA ACCTGGACAG ACCACAGATA
CTTGAAAGAA TATATAAAAA ACCGATGGCA CAGCAGTTTT TGAGTTCTTT CTTTGATTTT
TTTCTGGAAA ACAGGGAACA CAAATATCTG CTTGAAATTA TTGATCATGC TTTTGAACTT
TATTTTCAGA CTTATTTATT GCCAACTATT AAACTTCATC CTGGAAAAGA AATACATTTT
GTAGGTCTTG TTGCTGGAAA TTTTCAGGAT CAGTTACGGG CCACTGCTAA AAAACATGGC
CTTGAGATTA CATCAATTAC GAAAGAACCT ATATATAATT TACTAAACTA CTATTCAAAT
TAA
 
Protein sequence
MIAVVYSGSK TAFWKIARDG KTIAECSMPG INPCFNDQKT ILQYLNKKAT LINHAESIKK 
IYVFAAGASS DERRDELAET LGMFFRYSKI SVKDDLYGAA LSACFNSSGI VGILGSGANC
AYFDGKKPEK NNYGLGYVFG DEGSANYLGK VILKRFLQKK LPADLLKEFE LKYNLDRPQI
LERIYKKPMA QQFLSSFFDF FLENREHKYL LEIIDHAFEL YFQTYLLPTI KLHPGKEIHF
VGLVAGNFQD QLRATAKKHG LEITSITKEP IYNLLNYYSN